Pseudonocardia petroleophila: H6H00_24265
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Entry
H6H00_24265 CDS
T08626
Name
(GenBank) histidine kinase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ppel
Pseudonocardia petroleophila
Pathway
ppel03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H6H00_24265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_24265
Enzymes [BR:
ppel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
H6H00_24265
DNA repair and recombination proteins [BR:
ppel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H6H00_24265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_C
His_kinase
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
QNG51239
UniProt:
A0A7G7MEM8
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All DBs
Position
complement(4925378..4926937)
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AA seq
519 aa
AA seq
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MTGAASDDGVPLLVPPMMPAVTSGDPPTGPDWRVEVAWTGHRCVAYVHPPGPGRDGRVRL
LSGADNSMTHAYPEFSAPLLARCPPGGMVLDGTIVARGEEHAARPRLLKRRHSRYKPSEH
DIAAVPVDLQIADLLFFDGHDTTGLPYRERRTLLEGLGLDGAPVWTTALFPATELGSIMR
IAAAEGIDAFHARHLGARYRPGGRSKFWLRVPVQRTRQVVIGGWTPTDPHRADAIGTLLL
GVPDGDRLRYVGRVGIGVEERRRLDADLRGSARDDSPFTAELPADAARHAVWVLPDLVGL
VEFTGWVGGTRMRLPLWRGLADLDDLDDSQWAIPPTPAPAPDALAVAAPAAADPAPAATE
PPPPPAVAPAEPEGTDVRRLEQHFVYNSLNTIAALIRTDPFRARELLFGFADLSRAADGP
PESTVARELDAVRAYLQIEQARFGSRLQVEIELDDGVGSEPVATMQVLSVVREAVQKGIE
PRREGGLLTVAARRVDDGCEVAITAAGETARLLFPAAAP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggggccgcatccgacgacggtgtgccgctcctcgtcccgcccatgatgcccgcg
gtgacctccggcgatccgccgaccgggcccgactggcgcgtcgaggtggcgtggaccggg
caccgctgcgtcgcctacgtccacccgcccggcccgggccgcgacggccgggtgcggctg
ctgtcgggcgccgacaactccatgacccacgcctacccggagttctccgcgccgctgctg
gcccgctgcccgccgggcgggatggtgctcgacggcacgatcgtcgcccgcggggaggag
cacgccgcccggccgcggctgctcaagcgccggcactcccgctacaagcccagcgagcac
gacatcgccgcggtcccggtcgacctgcagatcgccgacctgctgttcttcgacggtcac
gacaccaccgggctgccctaccgcgagcgccgcacgctgctggaggggctcgggctcgac
ggcgccccggtgtggacgacggcgctgttcccggccaccgagctggggtccatcatgcgg
atcgccgcggccgagggcatcgacgccttccacgcccggcacctgggcgcccgctaccgc
ccgggcggccggtcgaagttctggctgcgcgtgccggtgcagcgcacccgccaggtcgtc
atcgggggatggacgcccaccgacccgcaccgcgcggacgcgatcggcacgctgctgctc
ggcgtgcccgacggcgaccggctgcgctacgtcgggcgggtcgggatcggggtggaggag
cggcgccgcctggacgccgacctgcgcggcagcgcccgcgacgactccccgttcaccgcc
gagctgcccgccgacgccgcccggcacgcggtgtgggtgctgcccgacctggtcgggctc
gtcgagttcaccggctgggtcggcggcacgcggatgcggctgccgctgtggcgcggcctg
gccgacctggacgacctcgacgactcgcagtgggcgatcccgcccaccccggcgcccgcg
cccgatgcgctggccgtcgcggccccggcggcggccgacccggcgcccgctgcgaccgag
ccgccacccccgcccgcggtcgcgccggccgagccggaggggaccgacgtccgccggctc
gagcagcacttcgtctacaactccctcaacacgatcgccgcgctgatccggaccgacccg
ttccgggcccgcgagctgctgttcggcttcgccgacctgtcccgcgccgccgacggcccc
ccggagagcacggtcgcgcgggagctcgacgccgtgcgcgcctacctgcagatcgagcag
gcccggttcgggtcccggctgcaggtggagatcgagctcgacgacggcgtcgggtcggag
ccggtggcgacgatgcaggtgctctcggtcgtccgcgaggccgtgcagaagggcatcgag
ccccggcgcgagggcgggctgctgacggtcgcggcccggcgcgtcgacgacggctgcgag
gtcgcgatcaccgcggcgggggagacggcgcggctgctgttccccgccgccgcaccctga
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