Pseudonocardia petroleophila: H6H00_30100
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Entry
H6H00_30100 CDS
T08626
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ppel
Pseudonocardia petroleophila
Pathway
ppel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H6H00_30100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_30100
Enzymes [BR:
ppel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H6H00_30100
DNA repair and recombination proteins [BR:
ppel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H6H00_30100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
SH3_18
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNG52242
UniProt:
A0A7G7MHI1
LinkDB
All DBs
Position
6147158..6150460
Genome browser
AA seq
1100 aa
AA seq
DB search
MTAVLAPSAFEVTGPLPTGTTVLEASAGTGKTFTIAALAARYVAEGRATLPELMLVTFGR
EATTELRERVRDRLVTAQRGLADPVAARAGDDEVLALLADAPPGEIAARRARLTRALAGF
DAATIATTHQFCQQMLAGLGVAGDTDPGAEFVESIDDLISEVVDDFYVRKYGARGAGNPA
FGRAEAGKLARAAVLDGQARLEPAHAPDGSPAQVRHRFATAVRGEVARRKRERRLYTYDD
MLTRLSAALQDADGTAARRLRSRYGVVLVDEFQDTDPVQWHILRTAFHGHTTLVLIGDPK
QAIYAFRGADVVSYLDATTAADRHATLARNWRSDAPLLHALDTLFDGAALGDDRIRVHTV
EAAHPAPRLAGAPVDTPVRIRVLARDGLPQSGRRLALAPPARARVARDCAAEIAALLASP
ARLDGEPVQPGDVAVLVRTNEQASVVRAALARVGVPAVSSGTASVFGTPVAKEWLTLLEA
LEQPRAFRVRAAALTCFVGVTAAQLCSEGADDLLDHLGGTLRDWAAVLHRGGMAALLEAV
TGTELPERILGTTDGERTLTDLRHVAQSLHAAATAQHLGPSALVDWLRHRIADAATDVGS
ERSRRLESDAAAVQIITVHRSKGLEFPVVHVPFAWDRYVGDPPFPLLHDERGARVLDVGG
PTGESWAAHCDRHRAEEAGEDLRLLYVALTRARSQVVTWWVPATTVGSSPLHRVLFGRGS
GGTLAESYKVPADPIALHALAALESSTIAVEAVGPPADPVFVPAERSAGEPAVAAFDRVL
DTAWRRTSYTALTATAGHHAPTALTEPDEAGTDDEPELEPVDGATGPADPSPMAALPLGA
AFGTLVHAVFESADLTAPDLAAELTAHAAEQLAFRPIAGLDAAALGSALLPAVQTPLGAL
ADGLRLADVAPRDRLAELDFELPLAGGDDATGPPLTLDALVPLLRTHLPPADPLHAYADD
LAALEPSPLRGYLTGSIDAVLRLPSGRFAIVDYKTNWLGAPGEPLTAAHYTPARLAVAMR
GAHYPLQALLYGVALHRYLRWRLPGYDPGRHLGGVLYLFVRGMCGPATPVVDGTACGVFG
WAPPPALTVELSALLERGAP
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
gtgacggccgtactggcgccgtcggcgttcgaggtcaccggcccgctgcccaccggcacc
accgtgctggaggccagcgcgggcaccggcaagacgttcacgatcgccgcgctcgccgcc
cgctacgtcgccgagggccgggccaccctgcccgagctgatgctggtcaccttcggccgc
gaggccaccacggagctgcgcgagcgggtgcgcgaccggctagtcaccgcgcagcgcggg
ctcgccgacccggtggcggcccgcgcgggcgacgacgaggtgctcgccctgctcgccgac
gccccgcccggggagatcgcggcccggcgcgcccggctcacccgggccctcgccgggttc
gacgccgccacgatcgccaccacgcaccagttctgccagcagatgctcgccgggctcggg
gtggcgggcgacaccgaccccggcgcggagttcgtcgagtcgatcgacgacctcatctcc
gaggtcgtcgacgacttctacgtgcgcaagtacggcgcgcgcggggcgggcaacccggcg
ttcgggcgcgccgaggcgggcaagctggcccgggccgcggtgctcgacggccaggcccgg
ctcgaaccggcgcacgcccccgacggctcccccgcgcaggtgcgccaccggttcgccacc
gcggtgcgcggcgaggtggcccgccgcaagcgggagcggcgcctctacacctacgacgac
atgctcacccgcctgtcggccgccctgcaggacgccgacggcacggccgcgcgacgcctg
cgctcccgctacggcgtcgtgctcgtcgacgagttccaggacaccgacccggtgcagtgg
cacatcctgcgcacggcgttccacgggcacaccacgctcgtcctgatcggcgaccccaag
caggcgatctacgccttccgcggcgccgacgtcgtcagctacctcgacgccaccaccgcg
gccgaccggcacgccaccctggcccgcaactggcgcagcgacgccccgctgctgcacgcc
ctcgacaccctgttcgacggcgccgcgctcggcgacgaccgcatccgcgtgcacaccgtc
gaggccgcgcacccggccccgcggctggcgggcgcacccgtcgacacgcccgtgcggatc
cgggtgctggcccgcgacgggctcccccagtccgggcgcaggctcgcgctcgcgccaccg
gcccgggcccgcgtggcccgcgactgcgccgccgagatcgccgccctgctcgcgagcccg
gcccggctcgacggggagcccgtccagccgggcgacgtcgccgtgctggtgcgcaccaac
gagcaggcgtcggtggtgcgggcggcgctggcgcgcgtcggggtgcctgcggtgtcgtcg
ggcacggcgagcgtgttcggcacaccggtcgcgaaggagtggctgacgctgctggaggcc
ctggagcagccgcgcgcgttccgggtgcgggccgcggcgctcacctgcttcgtcggcgtc
accgcggcgcagctgtgctcggagggggccgacgacctgctcgaccacctcggcggcacc
ctgcgcgactgggccgcggtgctgcaccgcggcgggatggcggcgctgctggaggccgtc
accggcaccgagctgcccgagcgcatcctcggcaccaccgacggcgagcgcaccctcacc
gacctgcgccacgtcgcccagtcgctgcacgcggcggccaccgcccagcacctcgggccg
tcggccctggtcgactggctgcgccaccgcatcgccgacgccgccaccgacgtcggatcc
gagcgcagcaggcggctggagtccgacgccgcggcggtgcagatcatcaccgtgcaccgc
agcaaggggctggagttcccggtcgtgcacgtgcccttcgcgtgggaccgctacgtgggc
gacccgccgttcccgctgctgcacgacgaacgcggcgcgcgggtgctcgacgtcggcggc
cccaccggtgagtcgtgggcggcccactgcgaccggcaccgcgcagaggaggcgggtgag
gacctgcggctgctctacgtggcgctgacgcgggcgcgcagccaggtcgtcacgtggtgg
gtgccggccaccacggtcgggtcgtcgccgctgcaccgggtgctgttcgggcgcggttcc
ggcggcacgctcgcggagtcctacaaggtgcccgccgacccgatcgcgctgcacgcactg
gcggccctggagtcgtcgaccatcgcggtggaggccgtgggcccgcccgccgacccggtg
ttcgtcccggccgagcgctccgcgggcgagccggcggtggcggcgttcgaccgcgtcctc
gacaccgcgtggcggcgcacctcctacaccgcgctcacggccaccgcgggccaccacgcc
cccaccgcgctcaccgagcccgacgaggccggcaccgacgacgagccggagctcgaaccc
gtcgacggcgccaccgggcccgccgacccctcgccgatggccgcgctcccgctgggcgcc
gcgttcggcaccctcgtgcacgcggtgttcgagtcggccgacctcaccgcccccgacctc
gccgccgagctcaccgcccacgccgcggagcagctcgcgttccgcccgatcgccggcctc
gacgccgccgcgctcggctccgcgctgctcccggccgtgcagaccccgctcggggcgctc
gccgacgggctgcggctggccgacgtcgcgccgcgcgaccgcctcgccgagctcgacttc
gagctgccgctggccggcggcgacgacgcgaccggtcccccgctcacgctcgacgcgctg
gtcccgctgctccggacgcacctgcccccggccgacccgctgcacgcctacgccgacgac
ctcgccgcgctggagccgtccccgctgcgcggctacctcaccggcagcatcgacgccgtg
ctccgcctgccctccggccggttcgccatcgtcgactacaagaccaactggctcggcgcc
cccggcgagccgctgacggccgcgcactacaccccggcgcggctggcggtggcgatgcgc
ggggcccactacccgctgcaggcgctgctctacggcgtcgcgctgcaccgctacctgcgg
tggcggctgcccggctacgacccggggcgccacctcggcggggtgctctacctgttcgtc
cgcgggatgtgcggtcccgccacgccggtcgtcgacggcacggcctgcggggtgttcggc
tgggctcccccgcccgcgctcaccgtcgagctgtcggcgctgctggagcggggggcgccg
tga
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