Pseudonocardia petroleophila: H6H00_30105
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Entry
H6H00_30105 CDS
T08626
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppel
Pseudonocardia petroleophila
Pathway
ppel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H6H00_30105 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_30105 (recD)
Enzymes [BR:
ppel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H6H00_30105 (recD)
DNA repair and recombination proteins [BR:
ppel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H6H00_30105 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
SH3_13
Helicase_RecD
AAA_16
SLFN-g3_helicase
SRP54
TraI_hel_assoc_N
nSTAND3
AAA_28
AAA_24
NTPase_1
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QNG55958
UniProt:
A0A7G7MT47
LinkDB
All DBs
Position
6150505..6152271
Genome browser
AA seq
588 aa
AA seq
DB search
MLGASGLLAGFNAAGVLDAADVHTAERVGGLGGEPDETVLLALALAVRAVRLGSVCVDLA
AADRTVLGEGDELVDVSALPWPDPGPWHDACLRSPLVADGADAPAGRPLRMVAGQLYLER
YWREEELVRLSLRERAAAAPPQHDLPALRAGLDDLFPDPRALRQRQAAAVASLRRVTVLA
GGPGTGKTTTVAKLLELLLRQPGPAPRIALAAPTGKAAARLQEAVTGSLPGELRGRVSEA
STLHRLLGWRPGGGSGAFRHDRTHRLPFDVVVVDETSMVSLTMMARLLDAVRPDARLVLV
GDPDQLASVEAGAVLGDLARAAGRPEPVLDAHLAALGLPAGVVHGVVTLDHTWRFDGAIA
DLARAVQQGDADTALAVLRRDDPQLAFTESTDEARADVVAAGRALAAAARAGDVGAAVGG
LDAHRVLCAHRRGPYGVARWTADVDRWLGHGRPGSRELWYPGRAVLVTTNDYDAGLFNGD
TGVAVETPDGLRVAFARGGPPTLFAPSRLSEVTGVHAMTVHRGQGSQFRRVTVVLPPAES
PLLTRELLYTAVTRAREFVRVVGTADAVRAAVERPVARASGLRHRLDD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggcgcgtccggcctgctggcgggcttcaacgcggccggggtcctcgacgccgcc
gacgtgcacaccgccgaacgggtcggcggcctcggcggcgagcccgacgagaccgtgctg
ctcgcgctcgcgctcgccgtgcgcgcggtccggctcgggtcggtctgcgtcgacctcgcg
gcggccgaccgcacggtgctcggcgagggcgacgagctcgtcgacgtctccgcactgccc
tggcccgatcccggcccgtggcacgacgcctgcctgcgcagcccgctcgtggccgacggc
gccgacgccccggccgggcggccgctgcggatggtcgcggggcagctctacctggagcgg
tactggcgcgaggaggagctggtgcggctctcgctgcgcgaacgcgccgccgccgccccg
ccgcagcacgacctcccggcgctccgggccgggctcgacgacctgttccccgacccccgc
gcgctgcgccagcgccaggccgccgccgtggcgtcgctgcgccgggtcaccgtgctcgcc
ggcgggcccggcaccggcaagaccacgaccgtcgccaagctgctggagctgctgctccgc
cagcccggtccggcgccgcggatcgcgctggccgcgcccacgggcaaggccgcggcccgg
ctgcaggaggccgtcaccgggagcctgcccggcgagctgcgggggcgggtgagcgaggcg
tccacgctgcaccggctgctcggctggcgtcccggcggcgggtcgggggcgttccggcac
gaccgcacgcaccggctgccgttcgacgtcgtggtcgtcgacgagacgtcgatggtgtcg
ctgacgatgatggcccggctgctcgacgccgtgcgcccggacgcgcggctggtgctggtc
ggcgaccccgaccagctcgcctcggtggaggccggggccgtgctgggcgacctcgcgcgc
gccgccgggcgccccgagcccgtcctcgacgcccacctcgccgcgctcggcctgcccgcc
ggggtcgtgcacggcgtcgtcaccctcgaccacacctggcgcttcgacggcgcgatcgcc
gacctggcccgcgcggtccagcagggcgacgccgacaccgcgctcgccgtcctgcgccgc
gacgacccgcagctcgcgttcaccgagagcaccgacgaggcgcgggccgacgtggtcgcc
gccgggcgggcgctggccgcggccgcgcgggcgggcgacgtcggggcggcggtgggcggg
ctcgacgcgcaccgggtgctgtgcgcgcaccgccgcgggccctacggggtggcccgctgg
accgccgacgtcgaccgctggctgggccacggccggcccgggtcgcgcgagctctggtat
cccggacgcgcggtgctggtcaccaccaacgactacgacgcggggctgttcaacggcgac
accggcgtcgcggtggagacccccgacgggctgcgcgtcgcgttcgcccgcggcggcccg
cccaccctgttcgccccgtcgcgcctgtcggaggtcaccggggtgcacgcgatgacggtg
caccgcggccagggcagccagttccggcgggtcacggtggtgctgccgcccgcggagtcg
cccctgctcacccgcgagctgctctacaccgcggtcacccgggcgcgggagttcgtgcgc
gtggtcggcacggccgacgccgtccgggccgcggtggagcgcccggtcgcccgggccagc
ggcctgcgccaccgcctcgacgactga
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