Pseudonocardia petroleophila: H6H00_30125
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Entry
H6H00_30125 CDS
T08626
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppel
Pseudonocardia petroleophila
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_30125
DNA repair and recombination proteins [BR:
ppel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H6H00_30125
Archaeal homologous recombinant proteins
H6H00_30125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
AAA_27
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QNG52246
UniProt:
A0A7G7MHI5
LinkDB
All DBs
Position
complement(6157142..6160510)
Genome browser
AA seq
1122 aa
AA seq
DB search
MRPVLLELDGFASFRERTVVDFTGAEYFALVGPTGSGKSTIIDAITFALYGSVPRWDNQR
TVSLALAPTAGRGTVKLVFDVGGARYVAARELRRAASGSVSVRSARLERLRDPAGTAGVD
EETDPLADGAGGVTAAVEELLGLPFGDFTTCVVLPQGDFAEFLHTEPRKRQEKLVRILGL
GLYDQIAREANSESAAQRQRAEVLAEQLTGYADATPEAEAAAQQRVDALVALAGRVDALV
PQVEAAAAEQAAAEADAARIRAEGTVLAALAAPDGLADLDARRSAAATALASAAAAHSSA
EAADGDARDALAQAPERGPLELVRSRHAELAALTGDLPGLRDRHAKALAAYDTAARDAAD
ARTALDTARTARDAATAAAAAAADTVRRVVAERDGLRALAVPAGLDALGRRRSAAVAALA
EADTALAAAESADARAREVLDAAPARGPLEQARREHADRASLTGERESALAARADAERAV
AAAAEQVRAARHALDHAEARRAAGQRADLAAALRPALVVGQACPVCEQAVAALPPAAVPA
DAGAEQAVADAAVALDAARAAEAAASAALARAAAETDRLDAALHRLRPEPDAATVERRLA
GLDEAERAAREADTAVRAARRAREAEAREVDAVRADTQDAAAALRTARDPLVPFGAPAVP
DDDVLAGWTALVGWAAEQAAARDGALTAARAAVAAADGESDAAGSALHAADRAATERRDE
ETAAARAEQEARGAVDAVQARLGELRTALDGAPSDADAARALERRTALEDAARTSDAALR
SARTALRAAERDAAQVADEVGAAWAALRAARDPLVPLGAPAVTGDDLRAAWDALAGWASG
AAAERRTAWAAADAAARSAREARDAAVRALVDDLAAHDLDLPPARPDASRTDPGPARPRE
RAEAGTGPSVDAAAARPAVAAAVERARGAHARLAERRATAARIGADRDAAEESQQVAKML
GGLLRSDGFPRWLVASALDALVADASTSLAELSGGQFALTHDNGEFLVVDHADADAKRPV
KTLSGGETFQASLALALALSAQMSGLAARGAARLESIFLDEGFGTLDEANLEVVASTLEN
LAARGDRMVGVVTHVPALAERVPVRFRVARDQRTSSVTRENL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgaggccggtcctgctggagctcgacgggttcgcctcgttccgcgagcgcacggtcgtc
gacttcacgggcgcggagtacttcgcgctggtcgggcccaccggctcgggcaagtccacg
atcatcgacgcgatcaccttcgccctctacggctcggtgccgcgctgggacaaccagcgc
acggtgtcgctcgcgctcgcgccgacggccggccggggcaccgtcaagctcgtgttcgac
gtcggcggggcgcgctacgtcgccgcgcgcgagctgcggcgggccgcgtcggggtcggtg
tcggtgcgctcggcccggctggaacggctgcgcgacccggcgggcacggcgggcgtcgac
gaggagaccgacccgctcgccgacggcgccgggggcgtcaccgcggcggtggaggagctg
ctcggcctgcccttcggcgacttcacgacctgcgtcgtgctgccccagggcgacttcgcg
gagttcctgcacaccgagccgcgcaagcgccaggagaagctggtgcgcatcctcgggctg
gggctctacgaccagatcgcgcgcgaggccaacagcgagtccgccgcgcagcgccagcgc
gcggaggtcctcgccgagcagctcaccggctacgccgacgccacgccggaggccgaggcg
gccgcgcagcagcgggtcgatgcgctcgtggcgctggccgggcgggtcgacgcgctcgtg
ccgcaggtcgaggcggcggcggccgagcaggccgcggccgaggccgacgcggcccggatc
cgcgcggagggcacggtcctcgcggcactggcggcccccgacgggctggccgacctcgac
gcccgccggtccgccgcggccaccgcgctcgcgagcgccgccgcggcccactcgtcggcg
gaggccgcggacggcgacgcccgcgacgcgctggcgcaggcccccgagcgcgggccgctg
gagctcgtccgttcccggcacgccgagctcgccgcgctcaccggcgacctgcccggcctg
cgcgaccgccacgcgaaggcgctggccgcctacgacaccgccgcccgcgacgccgccgac
gcccgcaccgcgctcgacaccgcccgcaccgcccgcgacgccgccaccgcggccgcggcg
gccgccgccgacaccgtccgtcgggtcgtcgccgagcgcgacgggctgcgcgcgctcgcc
gtccccgccgggctcgacgcgctcggtcgccgtcgcagcgccgccgtcgccgcgctggcc
gaggccgacaccgcgctcgccgcggcggagtcggccgacgcccgggcccgcgaggtcctc
gacgctgcccccgcccgcggcccgctggagcaggcgcgccgcgagcacgccgaccgggcg
tcgctcacgggggagcgggagtccgcgctcgcggcccgggccgacgccgaacgggccgtc
gcggcggcggcggagcaggtgcgggcggcccggcacgccctcgaccacgccgaggcccgc
cgggccgcgggccagcgcgccgacctcgccgccgccctgcgcccggcgctcgtggtgggg
caggcgtgcccggtgtgcgagcaggccgtggcggcgctgcccccggccgccgtccccgcc
gacgcgggagccgagcaggccgtcgccgacgcggcggtcgcgctcgacgccgcgcgcgcc
gcggaggccgccgcgtcagcggcgctggcgcgggcggcggccgagaccgaccggctcgac
gccgcgctgcaccggctgcggcccgaacccgacgccgccaccgtcgaacgccggctcgcg
ggcctcgacgaggccgaacgcgcggcccgcgaggccgacaccgccgtccgcgccgcgcgg
cgggcgcgggaggccgaggcccgcgaggtcgacgccgtgcgggccgacacccaggacgcc
gccgccgcgctgcgcacggcccgcgacccgctggtgccgttcggggcgcccgccgtgccc
gacgacgacgtgctggccggctggaccgcgctcgtcgggtgggcggcggagcaggccgca
gcccgcgacggcgcactgaccgcggcccgggccgccgtggccgccgccgacggcgagtcc
gacgccgccgggagcgcgctgcacgcggccgaccgcgctgccaccgagcgccgggacgag
gagaccgccgccgcgcgcgccgagcaggaggcgcgcggcgccgtcgacgcggtgcaggcg
cgcctcggcgagctgcgcaccgcgctggacggcgccccgtccgacgccgacgccgcccgc
gccctggagcggcgcacggccctggaggacgccgcgcgcacctccgacgcggccctgcgc
tccgcccgcaccgccctgcgcgcggcggagcgcgacgcggcgcaggtggccgacgaggtc
ggggcggcctgggcggcgctgcgcgcggcgcgcgacccgctggtgccgctcggggccccc
gccgtcaccggcgacgacctgcgcgcggcctgggacgccctcgccgggtgggcgagcggc
gcggcggccgagcggcgcaccgcctgggccgcggccgacgccgccgcccggtcggcccgg
gaggcgcgcgacgccgcggtgcgcgccctcgtcgacgacctcgccgcccacgacctggac
ctgccgcccgcccggcccgacgcctcgcgcaccgacccgggtcccgcgcggccgcgggag
cgcgcggaggccgggaccgggccctcggtcgacgctgcggccgcccggcccgcggtggcc
gcggccgtcgagcgggcccggggtgcgcacgcccgcctggccgagcgccgcgccaccgcg
gcgcggatcggcgccgaccgcgacgccgccgaggagtcgcagcaggtcgcgaagatgctc
ggcggcctcctgcgctccgacggcttcccccgctggctggtggcctcggccctcgacgcg
ctggtggccgacgcgtccaccagcctcgcggagctgtccggcggccagttcgcgctcacc
cacgacaacggggagttcctggtcgtcgaccacgccgacgccgacgcgaagcgcccggtc
aagacgctgtccggcggggagacgttccaggccagcctcgcgctcgcactcgccctgtcc
gcgcagatgtccgggctcgcggcccgcggggccgcccggctggagtcgatcttcctcgac
gaggggttcggcaccctcgacgaggccaacctggaggtcgtcgcgagcaccctggagaac
ctcgcggcccgcggcgaccggatggtcggggtcgtcacgcacgtcccggcgctggccgag
cgggtgccggtgcggttccgggtggcgcgcgaccagcggacgtcgtcggtcacgagggag
aacctgtga
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