Pediococcus pentosaceus SL4: T256_00030
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Entry
T256_00030 CDS
T02906
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppen03032
]
T256_00030
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_00030
Enzymes [BR:
ppen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
T256_00030
DNA replication proteins [BR:
ppen03032
]
Prokaryotic type
DNA Topoisomerases
T256_00030
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T256_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHA04281
LinkDB
All DBs
Position
6279..8810
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AA seq
843 aa
AA seq
DB search
MSEELSGRITDVNLSSQMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTP
EKPYKKSARIVGDVMGKYHPHGDSAIYESMVRMAQDFSYRYMLVDGHGNFGSVDGDGAAA
MRYTEARMSKITLEMLRDINKNTVDFQENYDGTEREPSILPARFPNLLVNGATGIAVGMT
TNIPPHNLSEVISAIHILMNNEDATTADLMEAVPGPDFPTGGIVMGKSGIRKAYETGHGT
IILRAKVDIETEKNGRERIVATELPYMVNKAKLIERIAELARDKRIEGITDVNDESDRDG
LRVVIDVRRDVSASVVLNNLYKMTLMQTTFGFNMLAIVNGAPKVLGLKEILQHYLVHQEE
VIRRRTEFDLKKAEARAHILEGLRIALDHIDEIIAIIRNSQTAEVAKDKLMNNYSLSSKQ
AQAILDMRLVRLTGLEREKVEDEYNKVMAAITDYRDILAHRERINEIIYKELLEIQERFG
DERRTELMVGEVLSLEDEDLIEEEDVMVTLTHNGYIKRMATSEFKTQNRGGRGIQGMGVH
DDDFIEHLVSTSTHDVLLFFTNAGKVYRMKGYEIPEYSRTAKGIPVINLLGISSGENIQA
VINIGRDNGDEDNENRYLFFTTLNGVTKRTPVAEFLNIRSNGLKAISLKENDEVINVVIT
DGKQNIIIGTHNGYAVSFKEADVRSMGRSATGVRGIRLRDEDYVVGSAILKPESKVLVIT
EKGYGKQTPASEYPIKGRGGKGIKTANITEKNGPLAGLVTVEGTEDVMLITDRGVMIRFD
VNNVSTTGRATLGVHVIKTDENSKVATMAIVDEAPVDDENQTQTPATEAAETESVTIEES
SEE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaagaattgtcaggacgaattacagatgtcaatttaagtagtcaaatgcgtaca
tcattcttggattatgccatgagtgttattgttgcgcgtgctttacctgacgttcgggat
ggactaaaacccgtccatcgtcgtattttatacgggatgaatgagttaggagttacacct
gaaaagccatataagaagtcagccagaatcgttggggatgttatgggtaagtatcatcct
catggtgactctgcaatttatgaatcaatggtccggatggcccaagactttagttaccgt
tacatgcttgttgatggacatggtaactttggatctgtcgatggggatggcgctgctgct
atgcgttataccgaagctcgaatgagtaaaattacattggaaatgctacgtgatatcaat
aaaaataccgtggatttccaagaaaactatgatggaacggaacgcgaaccatcaatttta
ccagcacgtttcccaaacttattagttaacggagcaactgggattgccgtggggatgacg
acgaatattccaccacataatttgtcagaagtcatcagcgctatccatattttgatgaat
aacgaagatgcaacaaccgccgacttgatggaagctgtccctgggccagacttcccaacc
ggtggaattgtgatgggtaaatcgggaatccgtaaggcatatgagactggacacggtacg
attattttacgggcgaaagttgatattgagactgaaaaaaatggtcgcgaacgcattgtg
gctacagaattaccatacatggtcaataaggctaaattgatcgaacgcattgctgaatta
gctcgtgataaacgaattgaaggaattactgatgtaaatgatgaatccgatcgtgatgga
cttcgagttgtcattgatgttcgtcgtgatgtcagtgcatctgtagttttgaataatctt
tacaagatgacattaatgcaaacgacctttggatttaatatgttggccatcgttaatggt
gctcctaaagtattaggcctaaaggaaattttgcaacactatcttgttcatcaagaagaa
gttattcgtcgacggactgaatttgatttgaagaaggctgaagcaagggcgcacatctta
gaaggtttgcggattgctttggaccacatcgatgaaattattgcgattattcgtaattca
caaacggctgaggttgctaaagataaattgatgaataactattcattatcaagtaagcaa
gctcaagcaatcttggatatgcgtttggtgcgtttgacaggactagaacgtgaaaaggtt
gaagacgagtacaacaaggtcatggcagcaattacggattaccgtgatattttagctcac
cgtgaacgaattaacgaaatcatttataaagagttacttgaaattcaagagcgctttggg
gatgaacgtcggacggaattgatggtcggtgaagttcttagccttgaagatgaagactta
atcgaagaagaagatgtcatggttactttaacccataatggttacattaagcgaatggct
acgtctgaatttaagacgcaaaatcgcggtggtcgaggaatccaaggaatgggtgttcat
gatgacgactttatcgaacatctggtttcaacttcaacccatgatgtactcttattcttc
accaatgccggtaaggtttaccggatgaaaggttacgaaatccctgaatatagccgaacc
gctaagggaattccagtaattaacttgcttggaattagtagcggagaaaatattcaggct
gtaatcaatattggacgtgataacggtgatgaagataatgaaaatcgttacctcttcttt
acaacgttaaacggtgtgacaaaacgaacaccggttgctgaattcctaaatatccgtagc
aatgggcttaaggccattagcttgaaggaaaatgatgaagtaattaacgtggttattact
gatggcaagcaaaacattattatcggaacgcataacggatacgcggtaagctttaaagaa
gcagatgtgcgttcaatgggacgttctgctactggggttcgcggaattcgtttacgagat
gaagattatgtcgtcggttcagcaatcttgaaacctgaaagcaaggtcttggttattact
gaaaagggttatggaaaacaaactccggctagtgaatacccaattaaaggccgcggcggt
aaagggattaagactgcgaatatcaccgaaaagaatggtccattagctggattagtaacg
gtggaaggaacggaagacgttatgttgattacggatcgtggggttatgattcgtttcgac
gttaataatgtttcaactacaggtcgggcgaccttaggggttcacgtaatcaagacggat
gaaaattctaaagttgctacaatggcaattgttgatgaagcaccagttgatgatgaaaac
cagactcaaactccagcaactgaagcagcagaaactgaaagtgtaactattgaagaaagt
tctgaagaataa
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