Pediococcus pentosaceus SL4: T256_00295
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Entry
T256_00295 CDS
T02906
Name
(GenBank) adhesin
Organism
ppen
Pediococcus pentosaceus SL4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KxYKxGKxW_sig
Gram_pos_anchor
MucBP
SSSPR-51
DUF2135
Motif
Other DBs
NCBI-ProteinID:
AHA04329
LinkDB
All DBs
Position
54707..59470
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AA seq
1587 aa
AA seq
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MSRRKLLNANEKKHYKMYKSGKQWFFAGVGVVAGLFGAGSGMTVSADEKPGVSLDLSQSE
DLLATQTSATIPGSTSTSSSSTGESTSNSTKAVDSKSTNATTDAKSETQSNSSAKSTSAD
KNSASQKTSESTSLSTSASTSQSKSLSSSLKETQPKSTSKDATKVADNQQSKQKDGKEQK
NAKSDAKQDVKQAAKDDNVKTSQSTASSSTASNQGSEHAQINDNISSLSNSTSGSITESA
SGSLSVSLSNSLFVSDSRKRDKDSASNSQSLAKSLSNAKAQAENASVQGVNDATQIVTYT
DENGKELAPSETTLHNSGEKPDIPGPKKIKGYVVDTSKSEIISNGAAVPFSLYLQLGKFS
SIEELLDLINSSDAYPVGTVEIKYVYKVYNSKISITGKNGATTTGNPLDIASLVNSITNA
DGSKGDINNVTSPDLDQVDWNKGGTYTVTLNYFDPSTLETATTTVTVTVEDNSASTSTST
SSSLSNSVSKSDSITSDSTSKSASTSGSTSTSVSGSKSVSQSISASKSTSTSGSTSVSVS
NSKSTSDSASRSVSTSKSTSTSGSTSVSNSKSTSDSVSQSISTSKSNSASASGSVSDSVS
KSKSDSITSDSISNSISTSVSGSKSTSDSASQSISTSKSTSTSGSTSVSNSKSTSDSVSQ
SISTSKSTSTSGSTSVSNSKSTSDSVSQSISTSKSTSTSGSTSVSNSKSTSDSVSQSIST
SKSDSITSDSISDSISTSISDSTSTSHSTSDPVSTSNSNSDSKSKLESRSTSTSISDSIS
DSNSKSTSESRSTSTSSSDSKSDSASKSDSISKSDSITSNSISESISTSNSDSSSKSDSK
STSESRSTSTSVSDSISDSNSKSTSESRSTSTSVSDSASDSTSTSHSISDSVSTSNSDSN
SKSTSKSRSTSTYISDSKSDSASKSDSVSKSDSITSNSISESISTSKSDSSSKSDSVSTS
DSRSTSTSVSDSISKSMSDSRSTSTSVSDSKSDSESKSDSISKSDSITSNSISESISTSN
SDSISDSNSKSTSDSRSTSTSISDSKSDSASKSDSVSKSDSITSDSISESISTSNSDSIS
DSNSKSTSDSRSTSTSVSDSTSDSTSTSHSTSDSVSTSNSDSDSKSMSDSRSASTSVSDS
KSDSASTSHSTSDSVSTSNSDSSSKSDSVSTSDSRSTSTSISDSTSDSASTSHSISDSVS
TSNSDSDSKSTSDSRSASTSVSDSKSDSESKSDSTSKSDSITSNSISESISTSNSDSSSK
SDSKSMSESRSTSTSVSDSTSDSASTSHSTSDSVSTSKSDSISKSDSITSNSISESISTS
KSDSSSKSDSKSTSESRSASTSVSDSTSDSISTSHSTSDSVSTSKSDSSSKSDSKSTSES
RSASTSISDSTSNSISDGNGSTSHDNHHGSGSESNSGSGSQSTSDSQSISTSISDSTSDS
KNSGSASQSTSTSQSKSTSASISTSQSASTSVSSSHNGASSQNDDNGKGTTNGNSEVDQQ
GNGQGNGGTGSYNQEQNFEATDTEIVRTTAQVKHQSTVDLNDASQNSRQQSRLPQTGETD
NSGWAWLGTTLLALVGLGKKRKKDNED
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaagaaagctgttaaatgctaatgaaaaaaagcattataaaatgtataaaagc
ggaaaacaatggttttttgctggtgtgggagtagttgcaggtttatttggcgcgggtagt
ggaatgacggttagtgctgatgaaaaaccgggagtcagtttagatttgagtcaatctgag
gatttattggcgactcaaacgagtgcgacgattcctggttcaaccagtacaagtagttca
tctactggagaaagtacgtcaaatagtacaaaagcagtagattcaaaaagtactaatgct
actactgatgcaaaatctgaaacacaaagtaatagtagtgccaaaagtacctcagcagat
aaaaattcggctagtcaaaagacttcagaaagcacaagtctttcaacaagtgcaagtacc
agccaatccaaaagtttaagtagttcattgaaagaaactcaaccaaagagtacatctaag
gatgcaactaaagtagctgataatcaacaaagtaaacaaaaagatggtaaagaacagaaa
aatgcgaaatcagatgctaagcaagatgtaaaacaagccgctaaagatgataatgtgaaa
accagccaatctacggcgtcttcatctactgcatcaaatcaaggaagtgagcatgctcaa
attaatgacaatatcagtagtttgagtaatagtacgtcaggaagtattactgaaagcgct
agtggttccttaagtgtgtctctctctaattcgttatttgtaagtgattctcgtaaacgg
gataaagactcggcttcaaatagtcaaagtcttgcaaaatcattgtctaatgcaaaagct
caagctgagaatgccagtgttcaaggtgttaatgatgccacgcagattgtaacttacaca
gacgaaaatggaaaagagctagcaccatcagagactacgttgcacaattcgggagagaag
ccagatataccaggaccaaagaaaattaaaggatatgtcgtagataccagcaaatccgaa
atcataagtaatggtgctgcggtacctttctcactttacttacaacttgggaagtttagc
tcaattgaagaactgctagacctgataaactcctccgacgcctatccagtaggaacggtt
gaaattaaatacgtttataaggtatataacagtaagatcagtattactggtaagaacggg
gcaacaactaccggaaatcctctcgacattgctagtttggtaaactcaattaccaacgcg
gatggttcaaagggtgatatcaataatgttacttcaccagatttagatcaagtagattgg
aataaaggtggtacatacaccgttacgttgaactactttgatcctagtactttagaaact
gcaacgactactgttaccgttacagtcgaagataattcagcaagtactagtacttcaaca
tcatcatcattgtcaaacagcgtctcgaagagcgactccattactagtgattcaacttca
aaaagtgcatcaactagtggttcgacttccacatcagtatcaggttcgaagtcagtgagt
caatcgatttcagcttcaaagagcacgtcaactagcggctcaacgtccgtatcggtatcg
aattcgaagtcaacgagtgactcagcaagtcgatcagtatcaacatcaaagagtacgtca
accagtggttcgacatccgtatcaaattcgaaatcaacgagtgattcagtgagccaatcg
atttcaacatcgaagagcaattcagcatctgcatcaggatcagtttcggacagtgtgtcg
aaatcgaagagcgattctataaccagtgactcgattagtaactcaatttcaacgtccgtg
tcaggctcgaaatcaacgagtgattcagcgagtcagtcaatttcgacatcgaagagtacg
tcaactagtggctcaacgtcagtgtcaaattcgaaatcaacgagtgattcggtgagtcag
tcaatttcgacatcgaagagtacgtcaactagtggttcaacgtctgtatcaaattcgaaa
tcaacaagtgattcggtgagtcaatcgatttcgacatcaaagagtacgtcaaccagtggt
tcaacgtccgtatcaaattcgaagtcaacaagcgattcagtgagtcagtcaatttcgaca
tcgaagagcgattctataaccagtgattccattagtgactcgatttcaacgtctatatcc
gatagcacatcgacaagtcattcaacatctgatccagtatcgacatcaaattcaaactca
gattcgaagagtaagttggaaagtcgctcgacctcaacatctatatcggattcaatttcg
gatagtaactcaaagagtacatcagaaagtcgctcgacttcgacatctagttctgattcg
aaatcagatagtgcatcaaaatcagatagtatttcgaagagtgattctataacaagtaac
tcaattagtgagtcaatctcaacgtcaaattctgattcaagctcgaagagtgattccaag
agtacatcagaaagtcgctcgacttcaacatctgtatcggattcaatttcagacagtaac
tcaaagagtacatcagaaagccgttcgacctcgacttctgtatcggattcagcttcggat
agtacatcgacaagtcattcgatatcggattcagtatcgacatcaaattcagatagtaac
tcaaagagtacatcaaaaagtcgctcgacttcgacatacatttctgactcgaaatcagat
agtgcatcaaaatcagatagtgtttcgaagagcgattccataacaagtaattcgattagt
gaatcaatctcgacgtcaaaatcagattcaagttcaaagagtgactcagtaagtacgtcg
gacagtcgctcaacctcgacttctgtatctgattcaatttcgaagagtatgtcagatagt
cgttcaacttcgacatcagtttctgattcgaaatcggatagcgaatcaaaatcagatagt
atttcgaagagcgattccataacaagtaactcaattagcgaatcaatctcaacgtcaaat
tctgattcgatttcagatagtaactcgaagagtacatcagatagtcgttcaacttcgaca
tctatatctgattcaaaatcagatagtgcatcaaaatcggacagtgtttcaaagagtgat
tctataacgagtgattcgattagtgaatcaatctcaacgtcaaattctgattcgatttca
gatagtaactcgaagagtacatcggacagtcgctcaacttcgacgtctgtatctgattca
acttcggatagtacatcgacgagtcattcaacgtctgattcagtatcgacatcgaactca
gattcagattcaaagagtatgtcagacagccgttcagcttcgacttcagtttctgattcg
aaatcagatagtgcatcaacaagtcattcaacatctgattcagtatcaacgtcaaattcg
gattcaagttcaaagagtgattcagtaagtacatcggatagtcgctcaacttcgacctcc
atatctgattcaacttcagatagtgcgtcaacgagtcattcgatatctgattcagtatcg
acatcgaactcagattcagattcgaagagtacatcggacagccgttcagcttcgacttca
gtttctgattcgaaatcggatagcgaatcaaaatcagatagtacttcgaagagcgattcc
ataacaagtaattcgattagtgagtcaatttcaacatcaaattcggattcaagttcgaag
agtgattccaagagtatgtcagaaagtcgttcaacctcgacttctgtctcagattcaact
tcagatagtgcatcaacaagtcactcgacatctgattcagtatcgacatcaaaatcagat
agtatttcgaagagtgattctataacaagtaattcaattagtgagtcaatctcgacgtca
aaatcagattcaagttcaaagagtgattcaaagagtacgtcagaaagtcgttcggcctcg
acttctgtctcagattcaacttcggatagtatatcgacgagtcactcaacatctgattca
gtatcaacgtcaaaatcagattcaagttcgaagagtgattcaaagagtacgtcagaaagt
cgttcagcttcgacttctatatctgattcaacttcaaattcaattagtgatggtaatgga
tcaacttctcacgataaccaccatggtagtggatcggaaagcaatagtgggtcaggtagt
caaagcacatcggattcacagagtatttcaactagcatttccgatagtactagtgatagc
aaaaatagtggatcggctagtcaaagcacttctacatcacaaagtaaatccacgagtgct
tcaataagtacttctcagagcgcttcaactagtgtaagttcatcgcacaatggagcatct
tcacagaatgatgacaacggaaagggtacaactaatggtaatagtgaggtagatcaacaa
ggaaatgggcaaggaaacggaggtactggtagctacaatcaagaacaaaactttgaagct
acggatactgaaattgtaagaacaactgctcaagttaaacatcaatctacggttgatttg
aacgatgctagtcaaaacagtcgtcaacaatctcgtctccctcaaactggcgagactgat
aacagcggatgggcctggttaggtacaacattgctagcgttagtaggtttgggcaagaaa
cgaaaaaaagataacgaagattaa
DBGET
integrated database retrieval system
