Pediococcus pentosaceus SL4: T256_01430
Help
Entry
T256_01430 CDS
T02906
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
T256_01430
Enzymes [BR:
ppen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
T256_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
DUF6231
TauD
Motif
Other DBs
NCBI-ProteinID:
AHA04509
LinkDB
All DBs
Position
321841..322401
Genome browser
AA seq
186 aa
AA seq
DB search
MKKIKEVIVVEGKDDTKRINLAVNADTLETRGSALSDETIEQIRQLQESRGVIVFTDPDF
SGEKIRKTISAEVPNVKHAFLKRKDAVPDHKGSLGVEHATPEVIRQSLEHLYTEDEDAAP
QITQSDLIDAGLIAGSAAKQRRIRLGDLLGIGYVNAKQLPKRLQLFQVEKSDFNHAVEQI
NGGINE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattaaagaagtcattgtagtagaaggaaaagatgatactaaaagaatcaac
ctagctgtcaacgctgataccttggaaactaggggatcagcgttatctgatgaaaccatc
gaacaaattcgccaattgcaagagagtcgcggagtaattgtgtttacagatccagatttc
tctggcgaaaagattcgtaaaactatttcagccgaagttcctaacgttaagcatgctttt
ttgaaacggaaagatgctgttccggatcataagggaagcttaggagtcgaacatgccact
ccggaggtgattcgccaatcacttgagcatctttatacggaagatgaggatgctgcaccg
caaattactcagagtgatttgattgatgctggattaattgcgggttcagcggcaaaacaa
cggcgaattcgtttgggagatttactagggattggatacgtaaatgccaaacaactacct
aaaaggttacaactgttccaagttgaaaaatcagattttaatcatgctgtagaacaaatt
aatggaggaattaatgaataa
DBGET
integrated database retrieval system
