KEGG   Pediococcus pentosaceus SL4: T256_02240
Entry
T256_02240        CDS       T02906                                 
Name
(GenBank) competence protein ComF
  KO
K02240  competence protein ComFA
Organism
ppen  Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:ppen00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppen02044]
    T256_02240
Secretion system [BR:ppen02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   T256_02240
SSDB
Motif
Pfam: ResIII DEAD Helicase_C Flavi_DEAD Helicase_RecD LysR_substrate DUF3638
Other DBs
NCBI-ProteinID: AHA04663
LinkDB
Position
488613..489932
AA seq 439 aa
MKEIEKQKYYGRLVLQPINAVPTDALDCRPAIVMKGNQIHCQRCGAITSSRDGALPDHQF
YCRKCINLGRVSTLVQLATIPEPNNFVANQSYLEWPGKLTAPQARCSKAIINSIDQQQNR
LLWAVTGAGKTEMIFPGINHALQKQKRICVASPRIDVVLELFPRFQEAFPQAKIALLHGR
SPAPYEYTQFVLCTTHQLLRFYHAFDVLIIDEVDSFPYAMNPELHYATKQARKLQGSTIY
LTATPDGKLLQQSRQAKLATSYLTRRFHGHPLPEIKVVSGQNWMKKLRKGRLPSPLSRFI
KEQIQAQRQFLIFVPKIEVLPKVLEALQQAFPTVKVLTVHAADPERVAKVQMMRKQEIDA
LITTTILERGVTFPGIDVAVLGADDAVFSMTALVQIAGRVGRSPQRPKGTVLFICPMLNR
NIKRAQAQIKFMNRKASEC
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaaagaaatagaaaagcaaaaatactatggacggctggttttacagccaatcaatgca
gtaccaacggatgcgcttgattgtcgaccagcaattgtaatgaaaggaaatcaaattcac
tgccaacgatgtggcgcaattacctctagtagggatggggcgttaccagatcatcaattc
tattgccgtaaatgtatcaacttaggtagagtttctaccctggttcagttagcgaccatt
cctgagcctaataattttgtggcgaatcagagttatttagaatggccgggaaagttaact
gctccgcaagctcgctgttcaaaagcgattattaattccattgatcagcaacagaatcgt
ttactttgggcggttactggggcagggaaaactgaaatgatcttcccgggaattaaccat
gccttacaaaaacaaaaaaggatatgcgtggcttcgccccgaattgacgtggtcttagag
ctgtttcctcgatttcaagaagcttttccacaggccaaaattgccttgcttcatggtcga
tccccagctccctatgaatatacgcagtttgtgctctgtacaacgcatcaattactacga
ttttaccacgcctttgatgttttaatcattgatgaagtggattcttttccttatgcgatg
aatcctgagctgcattatgcaaccaaacaggcccgtaaattacaaggatcgaccatttat
cttacagctaccccagacggaaaacttttacagcaaagtcggcaagctaaattagccacc
agttatctaactcggcgttttcatggacatccactaccagaaatcaaagtagtgagtggg
caaaattggatgaaaaagttaagaaagggtcgattgccaagcccattaagccgatttatt
aaggaacaaattcaagcacagcgccaatttttaatctttgttcccaaaattgaggtgtta
ccgaaagtattggaggctttgcaacaggcctttcccacggtcaaagttttaacagttcac
gcagcagatccagagcgggtggctaaagtgcaaatgatgcgtaaacaggaaattgacgct
ttaattacgacgactattcttgaacgtggagtgacttttccaggtattgatgtcgctgtt
ttaggagcagatgatgccgtcttttccatgacagcattggttcaaattgctggtcgagtt
ggtcgaagcccccaacgacccaaggggactgtattatttatttgtccaatgttaaatcga
aatataaaaagagctcaagcccaaatcaaatttatgaatcgaaaggcgagtgaatgttga

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