Pediococcus pentosaceus SL4: T256_02360
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Entry
T256_02360 CDS
T02906
Name
(GenBank) ATPase P
KO
K06958
RNase adapter protein RapZ
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppen03019
]
T256_02360
Messenger RNA biogenesis [BR:
ppen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
T256_02360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
SKI
AAA_16
NB-ARC
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHA04687
LinkDB
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Position
515653..516540
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AA seq
295 aa
AA seq
DB search
MNERLQFVVVTGMSGAGKTVAMQSFEDLGFFCVDNMPPALLPKFWELIKENGKISKVALV
VDLRSRGFYDQILGLLTGEEEQHNIKTDVVFLDATDEELVARYKETRRAHPLAMDGRVAD
GVRKERELLSPIKSEAQIVIDTTNMTPRELRSDIFGHFSTNKTIPKFHIEVVSFGYKYGS
PIDADIIMDVRFLPNPYYVTELKNKIGTDPAVYDYVMNQPATEEFYTDYLKLLMDIMPGY
QKEGKSNLTIAIGCTGGQHRSVAIAERLAKDLSKKYVTNISHRDAHKRKETVNRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacgactacaatttgttgtggtaacaggaatgagcggggctggtaaaacagtc
gcaatgcaaagctttgaagatttaggatttttctgtgtggataatatgccacctgcttta
ttaccaaagttttgggaattaattaaagaaaatggaaaaattagcaaagtagcgttagtc
gtagatttaagatcacgaggtttttatgatcaaatcttaggattacttactggtgaagaa
gaacaacataatattaaaacggacgttgtattcttagatgcgacggatgaagaattggtt
gctcgctataaggaaactcgtcgcgctcatccgttagcaatggatggacgggtagctgat
ggcgttcgtaaagaacgcgagcttttatcaccgattaaatcagaagcacaaattgttatt
gatacaactaatatgacacctcgtgagttacgaagtgatatttttggacatttctcaacg
aataagacgattcctaagttccacattgaagttgtttcatttggctataaatatggtagt
ccaattgatgccgatatcattatggatgtccgctttttacctaatccatactatgttact
gaattaaaaaataaaattggaacggatccagcagtttatgactatgtcatgaatcaaccg
gctaccgaagaattttatacggattacttaaaattattgatggatattatgccagggtat
caaaaggaaggtaaatccaacttaacgattgcaattggctgtactggtggtcaacatcgt
tcagttgctattgcagaacgtttggcaaaagatttatctaaaaaatatgtcacaaatata
tcgcatcgagatgcgcataaacgaaaggaaacggtaaatcgatcatga
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