Pediococcus pentosaceus SL4: T256_04045
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Entry
T256_04045 CDS
T02906
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T256_04045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_04045
Enzymes [BR:
ppen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T256_04045
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T256_04045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PIF1
Zn_ribbon_6
nSTAND_NTPase5
CENP-B_N
SLFN-g3_helicase
AAA_19
Cas3-like_C_2
T2SSE
UvrD-helicase
AAA_30
zf-CHY
Ligase_CoA
Motif
Other DBs
NCBI-ProteinID:
AHA04955
LinkDB
All DBs
Position
805005..807425
Genome browser
AA seq
806 aa
AA seq
DB search
MAKKFNVIVNVPALQTNTPFTYIANDAIKNDIKIGSRVIVPFGKSERPIQGFVVGEETTN
EFEGLKDIISVLEPEPLLNKELIELSEWLADQTYAFRVSCLNAMLPSLVKINTKRFIKIN
ETKITMETVIALLGEEQVTDLKVNELSFSQQKQLNQWIKDEFVTLEYVTEDSAKKKMINW
LWPTMDLSEYEQEQKKLRKNATKQVELLNIIKTLDVKKGISQASILNDYGVGRSTLNTAV
KNGWLVRKAVEQYRDPFEGRQMQLDQNLALNEEQQSAYNLITQAIEDKNAKPILVEGVTG
SGKTEVYLQSIQQVIKKGKTALLLVPEISLTPLMVKRVRARFGTQVAVLHSGLSDGEKFD
EWRRIVRNEVKVVVGARSAVFAPLRNIGIIIIDEEHSETYKQSDAPRYHARDVAIHRAKK
FECPVVLGSATPSLESRSRVERGRYDFVKIQKRANQKALPNIQVIDMRQHLGDGYNENFS
APMVEEIRHRILRKEQVVLMLNRRGFSSFVMCRTCGFVLTCPNCDVSLTMHMDSRTMRCH
YCGHEEVIPRLCKNCGSDKIRFFGTGTEKVQQQLAEIIPEARVLRMDVDTTRRKGAHERL
LERFGNHEADILLGTQMIAKGLDFPDVTLVGVLNADTALELPDLRASERTFQLLTQVAGR
AGRADKTGEVLIQTFNPDHYAIRLAQKQDYEDFFYKEMYLRHLGKYPPYYYTVLVSVSDR
DERQALKNAYEMLNIIQPQLSANAIVLGPTAKSISKIKQKYYYQILIKYQKEPKLHRALL
EVLNKSQEKFRQGTRISIDSEPQNFL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaatttaatgtcatcgtaaatgtcccagctttacaaactaatacaccattt
acatatatcgcaaatgatgccattaaaaatgacattaaaattggttccagagtaattgtt
ccttttggtaagtctgagcgacctatccaaggttttgtggtcggagaagaaaccactaat
gaatttgaaggattgaaggacatcatttcagttttagaaccggaaccattgctaaataaa
gaattgattgagctttcagagtggttagccgaccaaacgtatgcttttcgagtaagttgt
ttaaatgcaatgcttccaagtttggtgaaaattaataccaagcgttttattaaaatcaat
gaaacaaaaattacaatggaaaccgtgattgccttattaggggaagaacaggttacagat
cttaaagtaaatgaactcagttttagccaacaaaaacaacttaatcagtggattaaagat
gaattcgttacattagaatatgtcacggaagattctgctaaaaagaaaatgattaattgg
ctttggcctacgatggatttaagtgagtatgaacaagaacaaaaaaagttaagaaaaaat
gctacgaaacaagttgagttactaaatataattaaaacgttagatgtcaaaaagggaatt
tcgcaagcttcaattttaaatgattatggtgtaggacgctcaacattaaatacagcggtt
aaaaatggatggctagttcgtaaggcggttgagcaatatcgcgatccttttgaaggacgt
cagatgcagcttgatcaaaatttggctttaaatgaagaacagcaatccgcttacaactta
attacacaagcaattgaagacaaaaatgctaaaccaattttagttgaaggcgttactgga
tcgggaaaaacagaagtttatttgcagagtatccaacaggtaataaaaaaagggaaaact
gctcttttactggttccggaaatttccttaacacccttaatggtgaaaagagttcgggcg
cgttttggtacacaagtggctgttctccatagtggactttctgacggtgaaaagtttgat
gaatggcgaagaattgtacgaaatgaagttaaagtagtagttggagcacggtcggcggtc
tttgcaccactacgtaatattggtattataattattgatgaggaacattcagaaacgtat
aagcaatctgatgcaccgcgttatcatgctcgagatgtagcgattcatcgtgcaaagaaa
tttgaatgtcccgtagtcttgggaagcgctactccttctcttgagagtcgttctcgcgtg
gaacgtgggcgatacgattttgtaaaaattcaaaaacgagccaatcaaaaggcgttaccg
aatattcaagtgatcgatatgcgtcagcatttaggtgatggatataatgaaaacttttcg
gcacccatggttgaagaaattcgacatcggattttaaggaaagaacaagtagttttaatg
ttgaatcggcgaggtttttcatccttcgtgatgtgtcgaacgtgtggttttgtcctaact
tgtcctaactgtgatgtatctttaacgatgcatatggattctcgaaccatgcggtgtcat
tattgtggtcatgaagaagtaatcccacgtttatgtaaaaattgtggtagtgataaaatt
cggtttttcggtactggaactgaaaaagttcaacaacaattggcagaaatcattcctgaa
gctcgcgtgcttcggatggatgttgataccacccgtcgaaagggagcacatgagcgtcta
ttagaacgttttggcaaccacgaggcagatattcttttgggtacgcaaatgattgctaag
gggttggattttcctgatgtaaccttggtaggagttttaaatgcggatacagcattagaa
ttaccggatttacgggcgagtgagcgaactttccagcttttaactcaggttgctggacgt
gctggacgtgctgataagaccggtgaagtactaattcaaacctttaaccccgatcactat
gcaattcgtttagctcaaaaacaagattatgaagactttttctataaagaaatgtatttg
aggcatttaggcaaatatccgccttattactacacggtattagttagtgtttcggatcgg
gatgaaagacaagcgttaaaaaatgcttacgaaatgttgaatattattcaaccgcagtta
tcagctaatgcaattgtgttagggccgacggctaaatctatctcaaaaattaaacaaaaa
tattactaccaaattttaattaaatatcaaaaagagcctaaattacatcgtgcgctgtta
gaagtattgaacaaatcgcaggagaaatttagacaggggacacggattagtattgattcc
gaaccacaaaactttttgtaa
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