Pediococcus pentosaceus SL4: T256_04355
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Entry
T256_04355 CDS
T02906
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppen03016
]
T256_04355
Enzymes [BR:
ppen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
T256_04355
Transfer RNA biogenesis [BR:
ppen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T256_04355
Prokaryotic type
T256_04355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHA05017
LinkDB
All DBs
Position
866940..867839
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AA seq
299 aa
AA seq
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MDGIIPINKERGMTSHDVVAKVRGILRTKKVGHSGTLDPSVDGVLPICVGRATKVVDYLM
GFGKVYQGSITLGFSTTTEDLDGEVVETKKLDEPLTDEQINQTLTAMTGTLIQIPPMYSA
VKVKGRKLYEYARAGETVERPQRQIKVYDFVQTRPSIFDAEKGQQTIYFKVSCGKGTYVR
TLAVDFGRHFGLPAVMSDLSRLASGGFKIEECLTLSDLEQARDEDRLSTVIQPLDRALDN
FNTITISDIEWEIVKNGGFLNRPQTDEIIALKYNGNIQALYQYDTNRQNYIPKKMLLVR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatggaataattccaattaataaagaacgaggaatgacgagtcacgatgttgttgcc
aaggttcgaggtattttaagaactaaaaaagttggtcatagtggaacccttgatcctagt
gttgacggagttttaccaatttgtgttggcagagctacgaaagttgtggactatttaatg
ggatttggaaaagtttatcaaggctcaattacgttaggtttctcgactactacggaagat
ctagatggtgaagtagttgaaaccaaaaaacttgatgaaccattaacggacgaacaaatt
aatcaaactttgactgcaatgacaggaactttaattcaaattccacccatgtattccgca
gtaaaggttaagggccgcaagttatatgaatacgcccgcgctggtgagacggtagaacgt
cctcaacgtcaaattaaggtttatgattttgttcaaactcgcccatcaatttttgatgca
gaaaagggacaacaaactatttatttcaaggttagttgtggcaaggggacgtatgtgaga
actttagcagttgattttggtcgtcattttggattgccagcggtgatgtctgatttaagt
cgcttggctagtgggggattcaaaattgaggaatgcctgacgttatccgacttagaacaa
gcacgagatgaagatcgtttatcgacggttattcaacctttagatcgggccttggataac
tttaatacaattacaatttcagatattgaatgggaaattgttaaaaatggaggatttttg
aatcgtccgcaaactgatgaaatcatagctttaaaatataatgggaatattcaggcgtta
tatcagtatgatacaaatcgtcaaaactatattcctaaaaaaatgttgttggtgagatag
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