Pediococcus pentosaceus SL4: T256_05295
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Entry
T256_05295 CDS
T02906
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppen03032
]
T256_05295
03036 Chromosome and associated proteins [BR:
ppen03036
]
T256_05295
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_05295
DNA replication proteins [BR:
ppen03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
T256_05295
Chromosome and associated proteins [BR:
ppen03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
T256_05295
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
T256_05295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
HTH_78
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
AHA05174
LinkDB
All DBs
Position
complement(1037708..1037983)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELVDNVAKVTGLTKKDATAAVDAVFSSIQDDLKKGEKVQLIGFGTFEVRNRAARK
GRNPQTGKEIEIAASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagaattagttgataacgttgctaaagtaacaggtttaactaaaaag
gatgcaaccgcagcagtagacgctgtatttagctcaattcaagatgacttgaagaagggt
gaaaaagttcaattaatcggttttggtactttcgaagtacgtaatcgtgcagctcgtaag
ggccgtaacccacaaactggtaaagaaatcgaaatcgcagcaagtaaagttcctgcattc
aagcctggtaaggctttgaaggacgctgttaaataa
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