Pediococcus pentosaceus SL4: T256_05570
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Entry
T256_05570 CDS
T02906
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppen03016
]
T256_05570
Enzymes [BR:
ppen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
T256_05570
Transfer RNA biogenesis [BR:
ppen03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
T256_05570
Prokaryotic type
T256_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AHA05228
LinkDB
All DBs
Position
complement(1095441..1096367)
Genome browser
AA seq
308 aa
AA seq
DB search
MQLEFLGTGAGSPGKFRNVTSVALKLLDESNEVWLFDCGEATQHQILKTNIKPRKIDKIF
ITHLHGDHIFGLPGFLSSRSNQGGSEELTIFGPTGIKDFVMTSLRISESKLSYRIKFVEI
AQEGVLFEDQNYIVNVAELDHRIKSYGFRVKEKDHPGELLVDKLKELAIPSGPIYGQIKQ
GKEVTLDDGRVINGQDFIGKPQPGRVVTVLGDTRQTPNIELLAKDADALVHESTFGKQEG
SLARNYYHSTNIQAAKIAKQANARQLLLTHISARYTGKLSKQLESDAKEIFSNSKVVRDF
DIIDIPLP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgaatttttaggaactggagccggaagtcccggtaaattccgtaatgttact
agtgtagcattaaaattattagatgaaagtaatgaagtttggctttttgactgtggtgaa
gcaacccagcatcaaatcttaaaaactaatataaaaccccgtaaaattgataaaatattt
attacccatcttcatggtgatcatatttttggtttgccaggtttcttaagtagtcgttct
aatcagggtggtagcgaagaacttactatcttcgggccaactggcattaaagactttgtg
atgacctcattgcgcatttcagagtcaaaactttcatatcgaataaaatttgttgaaata
gctcaagagggcgttttatttgaagatcaaaattatattgttaacgttgctgagttagat
catcgaattaaaagttacggttttcgggtaaaggaaaaagaccatccaggtgaactttta
gtcgataagctaaaagaattagcgataccttcaggacctatttatggtcagattaagcaa
ggtaaagaagttactttagatgacggtagagttattaacgggcaagatttcattggaaaa
cctcaaccaggtcgagtagtcacagttttgggcgacacacgacaaacgcctaatatcgaa
cttttagctaaagatgcggatgccttggtccacgaaagtacttttggaaaacaagaggga
agcttggcacgtaattattatcattcaactaatattcaagctgcgaaaattgctaagcaa
gctaatgctcggcaattattgctaacccatatttcagctcgttatacgggaaagctcagt
aagcaacttgaaagtgatgcaaaggaaatttttagtaatagtaaagttgttcgtgatttt
gacataattgatattccattaccttaa
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