Pediococcus pentosaceus SL4: T256_05660
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Entry
T256_05660 CDS
T02906
Name
(GenBank) competence protein ComE
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen00240
Pyrimidine metabolism
ppen01100
Metabolic pathways
ppen01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
T256_05660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppen02044
]
T256_05660
Enzymes [BR:
ppen01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
T256_05660
Secretion system [BR:
ppen02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
T256_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
Beta-prop_ATRN-LZTR1
SAM_2
CBM-like_CFAP184
Churchill
Motif
Other DBs
NCBI-ProteinID:
AHA05246
LinkDB
All DBs
Position
complement(1114603..1115085)
Genome browser
AA seq
160 aa
AA seq
DB search
MDNRIDWDQYFMTQATLLSLRSTCTRLSVGAVIVRDRRVIAGGYNGSVSGDVHCIDEGCY
LVEGHCVRTIHAEMNAVLQCAKFGVATDGAEVYVTDFPCLQCTKMLLQSGIIKINYLRNY
HNDQYAVELLKRKNVEIKQIKFSEDDLDKININHILREGE
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagaattgattgggatcaatattttatgacacaggcaaccctgttatcactc
agaagtacgtgcacgcggctttcagtgggggcagttattgttagagaccggcgagtaata
gctgggggctataatggttcagtttctggagacgtacattgtattgacgagggatgctat
ttagtagagggacactgcgttcgtacgatacacgcggaaatgaatgcggttctgcaatgt
gctaagtttggtgttgcaacggatggtgcagaagtttatgtaacggattttccctgttta
cagtgtacaaaaatgttgttacagtccggaattattaaaattaattatcttagaaattac
cataatgaccaatatgccgtagagctcttaaaaagaaagaatgtcgaaattaagcagatt
aaattctcagaggatgatttagataaaattaatattaatcatattttaagagaaggtgaa
tga
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