Pediococcus pentosaceus SL4: T256_06275
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Entry
T256_06275 CDS
T02906
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T256_06275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_06275
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T256_06275
RecFOR pathway proteins
T256_06275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
WIYLD
PsbU
DUF2642
SNCAIP_SNCA_bd
Motif
Other DBs
NCBI-ProteinID:
AHA05352
LinkDB
All DBs
Position
complement(1223337..1223924)
Genome browser
AA seq
195 aa
AA seq
DB search
MYEYLDGVVVNVNPAYIVVDVNGVGFLVNVANPYSFELDAKQKVFVHQAVSENDQTLYGF
KKAEDKELFLNLLKVKGIGPKSALAILANDDHTGLINAINNDDVSYLKKFPKIGPKAAQQ
IILDLKGKVAVENEVGTLFDLSTTSNQALDEALEALIALGYSEKEVKKLTKKLSEQTDRT
TDQYISSGLKLLMKG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaatatttagatggagtcgtcgttaacgttaatccagcttatattgttgttgat
gtcaatggagttggatttttagttaacgtggctaatccatatagttttgaactagatgct
aaacagaaagtttttgttcatcaagctgtttcagaaaatgatcaaactttatatggattt
aaaaaagctgaagataaagaactttttcttaatttattaaaagttaaggggattggtccg
aaaagtgcgttggctattttagcgaacgatgatcatacagggttgattaatgcgattaat
aatgatgatgtaagttatctcaaaaagttccctaagattggtcctaaggctgctcaacaa
atcattctagatttgaagggcaaagtggcggttgaaaatgaagtaggaaccctttttgat
ttatcaactacttcaaaccaagctctagatgaagctctagaagctttgattgcattaggt
tattctgaaaaagaggttaagaaattaactaagaaattgagtgaacaaactgatcggaca
actgatcagtatattagttcgggattaaaattattgatgaaaggataa
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