Pediococcus pentosaceus SL4: T256_06880
Help
Entry
T256_06880 CDS
T02906
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T256_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppen03021
]
T256_06880
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_06880
Enzymes [BR:
ppen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T256_06880
Transcription machinery [BR:
ppen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T256_06880
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T256_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AHA05465
LinkDB
All DBs
Position
complement(1345487..1346431)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPKIHKIDENDNYGRFVIEPLERGYGTTLGNSLRRILLSSLPGAAITSVQIDSVL
HEFSTIEGVVEDVTQIILNLKKVSLKIESDEDKTLEINVAGPANVTAGDIMGDGDVVILN
PELPICTVAEGTTFHAVLTADTGRGYTSADENKARKVDMPIGVLPIDSIYTPIERVNYQV
ENTRVGQRDDYDKLTLDIWTDGSITPSEATSLSAKILTEHLAIFVNLNDQAKETEIMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINSVQELTDRTDAQMMKVRNLGRKSLVEIQ
EKLSLLGLGFRSED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgagaagccaaaaattcataaaattgacgaaaatgacaattatggccga
tttgttattgaacccttagaacggggatatggtacaacgcttggtaattcacttcgtcgt
atcctattatcatcattgccaggagcagctattactagtgttcaaattgatagtgtttta
catgaattctcaaccattgaaggtgttgtagaagacgtaacacaaattattttgaatctt
aagaaggtttcgttgaagattgaatctgatgaagataaaacattagaaatcaatgttgcg
ggtcctgctaatgtaactgctggcgatattatgggagacggtgacgtagtgattcttaat
cctgagttaccaatctgtactgtagctgaaggtactacattccatgcagtactcactgct
gacactggccgtggatatacatctgcggacgaaaacaaggctcgaaaggttgatatgcca
atcggtgtattaccaatcgattctatttataccccaattgaacgtgttaattatcaagtt
gaaaatactcgtgttggtcaacgagacgactatgataaacttacgctcgatatttggact
gatggttctatcactcctagtgaggcaacaagtttatctgctaaaattttaacagaacac
cttgcaatctttgttaaccttaatgatcaggctaaagagactgaaattatggttgaaaaa
gaagaaactcacaaggaaaaaatgcttgaaatgacaattgaagaattagatctttcggtc
cgttcatacaattgcttaaaacgagcaggtattaacagtgttcaagaattaactgaccgc
actgatgctcaaatgatgaaagttcgtaatcttggacgtaagtcattggttgaaatccaa
gagaaacttagtttattgggcttaggtttccgttcagaagactaa
DBGET
integrated database retrieval system
