Pediococcus pentosaceus SL4: T256_07425
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Entry
T256_07425 CDS
T02906
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_07425
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
T256_07425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
AAA_22
ABC_tran
AAA_16
SLFN-g3_helicase
nSTAND3
AAA_14
nSTAND_NTPase5
AAA_24
KdpD
KTI12
Rad51
AAA
GvpD_P-loop
CbiA
TniB
AAA_18
AAA_5
NACHT
Zeta_toxin
NPHP3_N
ATPase_2
RsgA_GTPase
HypA
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AHA05564
LinkDB
All DBs
Position
complement(1435075..1436445)
Genome browser
AA seq
456 aa
AA seq
DB search
MAKVKTQFLCSECGYVSPKFLGRCPNCGRWNTLVEERISEPKNERKSRVSFEGKSSKPQL
ISEVKMHEEPRVKTEMEELNRVLGGGVVDGSLVLIGGDPGIGKSTLLLQLSGQLAATDRD
VLYVSGEESASQIKMRAERLQVNSERFYLYPETDMSNIRAVIEELHPQYVIIDSVQTMQE
PDIDSAVGSVSQIREITAELMQIAKTNNITIFIVGHVTKGGAIAGPKILEHMVDTVLYFE
GDLHHTYRILRAVKNRFGSTNELGIFEMREEGLREVANPSEIFLEERLQDANGSAIVVSM
EGTRPILVEIQALITPTIFGNAQRTASGLDRNRVSLIMAVLEKRANLTLQNQDAYLKAAG
GVKLDEPAIDLAIAMSIVSSFKNQGTRPTDSFVGEIGLTGEIRRVNRIEQRVAEAQKLGF
QRILIPKNNLKGWNPPKGIEVVGVTTITDAIRKAFN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaagtaaaaacacagtttttgtgttcagaatgtgggtatgtttcacctaaattc
ttaggacgttgtcctaattgtggaagatggaacactctggttgaagagcggattagtgaa
cctaaaaatgaacgtaagagtcgcgttagttttgagggtaaaagtagtaaaccacaacta
atttcagaagttaaaatgcacgaagaaccgcgggttaaaacagagatggaagaactgaac
cgagtgctcggtggtggagtagtggatggctcactagttctaattggtggagatccagga
attggtaagtcgaccctattgttacaactatctgggcaattagctgctactgatcgagat
gttttatacgtgtctggggaagaaagtgcttcacagatcaagatgcgcgccgaacgttta
caggttaacagtgaacgtttttacttgtaccctgaaactgatatgtccaatattcgtgcg
gtcattgaggaactacatcctcagtatgtaattattgattctgttcaaaccatgcaagag
cccgacattgattcagcagtaggtagtgtatcgcaaattcgagaaattacagccgaatta
atgcagattgctaaaacaaataacattactatttttattgttggtcatgtaactaaaggc
ggagccattgctggtcctaaaattttagaacatatggttgatacagtactttattttgaa
ggcgatttgcatcatacgtatcgaattttacgagcggttaaaaatcgatttggttctacg
aatgaattgggaattttcgaaatgcgagaggaagggcttcgagaagtagccaatccttcg
gaaatctttttagaggaacgcctgcaagatgctaacggttccgctattgtggtttcgatg
gaaggtactcgaccaattttggtcgaaattcaagctttgattacgcctaccatttttggg
aatgctcagcggactgctagcgggttggatcgtaaccgagtctcattaattatggcagtt
ttagaaaaaagggctaatttaacgttgcagaaccaagacgcctacttaaaggctgctggc
ggagtgaaattggatgagccagcaattgatttggcaattgcgatgagtattgtatcgagt
tttaagaatcaagggacgagaccgactgatagctttgttggcgaaattggtttaactggt
gaaatccgacgggttaatcggattgaacaacgggttgccgaagctcaaaaactaggtttt
caacgaattttaattcctaagaataatttgaagggttggaatccacctaaagggattgaa
gtagtaggagtaacaacgattacggacgcaattcggaaggcgtttaattag
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