Pediococcus pentosaceus SL4: T256_07515
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Entry
T256_07515 CDS
T02906
Name
(GenBank) S1 RNA-binding protein
KO
K06959
protein Tex
Organism
ppen
Pediococcus pentosaceus SL4
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
T256_07515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
HHH_9
S1
YqgF
T2SSK
HHH_7
S1_RRP5
HTH_Tnp_ISL3
ATP-synt_ab_C
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AHA05581
LinkDB
All DBs
Position
complement(1452076..1454244)
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AA seq
722 aa
AA seq
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MEEKILKIVGTKLKDYRANQIKATLEMLEDGNTVPFIARYRKERTQSLDEVQIREIQATY
HQTETLEKRKADVLKNIEDQQKLTPELAQKIRTADVLQTVEDLYLPYKQKRRTKATIAKE
AGLEPIATWILGFPQGTLAKQLQSAINPEQDLNSIDDVLAGVHEILAEAFSDQADIREWV
RNYTKKNGRLTAEVKPKGQAIDENGVYGIYYDFSEKLNQVVSHQILAINRGEKEKVLRAK
IEVDPQGIERYLHFRLIGKKTGEAVGIVEDAYQDAYKRFIGPAIERELRAELTAMGDQQA
IKVFGENLYHLLMQAPLKGKVVLGFDPAYRTGCKLAVIDENGKFLDKLVIYPHKPASMEK
RAKAGKQLKDFIEKYQVEMIAIGNGTASRESEEFVANLIKEIKRPIYYVIVNEAGASVYS
ASNEAREAFPDLQVEERSAISIGRRLQDPLAELIKIDPQAVGVGQYQHDVAQKDLHEQLD
NVVETAVNQVGVNLNTASPELLTHISGLTKTTAKNIVNFREENGSYHSRKQLKKVPRLGP
KAYEQAIGFLRIVDGDDILDNTGIHPESYAVVKQLMQLLGLKLQDIGKAEVNEKLQGVQV
KAVAEQLNVGWETLADIIAELQKPGRDLRDEMPAPLLRSDVLTLEDLKPGMELQGTVRNV
IDFGAFVDIGVKQDGLVHISKLKKGFVKQPSDVVAVGDIVKVWVESVDVERHRIQLTMIP
KD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaaaaattttaaaaattgtcggaactaagttaaaagattatcgagcaaatcaa
attaaagctacactagaaatgctagaggatggaaatacagttccctttatcgctcggtat
cgaaaagaacgaactcaaagtttagatgaagttcaaattcgggaaattcaagcaacgtac
catcagactgaaacacttgaaaaaagaaaagccgatgttttaaaaaatattgaagatcaa
caaaaattaactccagaattggcgcaaaagattcgtacagcagatgtcttacaaacggta
gaggacttgtatttaccctacaaacaaaaacggcggacgaaagcgacaattgctaaggaa
gcaggtttagaaccgattgcaacctggattttgggttttccacaaggaactttagctaag
caacttcaaagtgcgattaatccagaacaggatcttaatagtattgacgatgttttagca
ggagttcacgaaatattagccgaagccttctcggaccaagctgatatccgtgaatgggtg
cgaaattataccaaaaaaaatggacgattaacggcagaagtaaagcccaagggccaagca
attgatgagaacggtgtttatgggatttactatgacttcagtgaaaaactgaatcaagtg
gtctcccaccaaattttagcgattaaccgaggcgaaaaagaaaaggtcctacgagctaaa
attgaggttgatcctcaaggaatcgaacgataccttcactttcgtttgattggtaaaaag
accggcgaagcagttggtatagtcgaagatgcatatcaagatgcttataaacgttttatt
ggcccagcaattgaacgtgaattacgtgcagaactgactgctatgggcgaccaacaggct
attaaggtgtttggtgaaaacttataccatctcttgatgcaagcccctctaaagggaaaa
gtagtcttaggttttgacccagcttatcggaccggttgtaagttggcggttattgatgag
aacggtaaatttttagataaattagtgatttatccacataaaccagcttcaatggaaaaa
cgagctaaagccggaaaacaattaaaagatttcattgagaagtaccaagttgaaatgatt
gcaattggaaacggaacagcaagtcgcgaatcagaagaatttgtagctaatttaattaaa
gaaattaagcgtcccatctattatgtaattgtcaatgaagcaggagcgtcagtttattct
gctagtaacgaagcccgagaggcatttccagatcttcaagttgaagaaagaagtgcgatt
agtattggacgacgcttacaagatcctttagcagaattgattaagatcgatcctcaagca
gttggagtcggtcaatatcaacatgatgttgcgcaaaaagatttacatgaacaacttgat
aacgtcgttgaaacggccgttaaccaagttggagttaatttaaatactgctagcccagag
ttgctaactcatatttcggggttaactaaaacaaccgctaaaaatattgttaattttcga
gaggaaaatggaagctatcattctcgcaaacaattaaaaaaagtccctcgcttaggacct
aaagcctatgaacaagcaattggttttttgagaattgttgatggagatgatattttggat
aataccggaatccatcctgaaagttatgcagttgttaaacaattaatgcagttattggga
ctaaaattgcaagacattggtaaagcagaagttaacgaaaaactacagggagtgcaggtt
aaagcagtcgctgaacagcttaacgttggctgggaaactttagctgatattattgccgaa
ttgcagaaaccgggacgtgatttgcgagatgaaatgccggcgccattacttcgatcagat
gttctaacgctagaggaccttaaaccagggatggaacttcaagggacagtacgaaatgta
attgatttcggagcatttgtagatattggggttaaacaggacggtttagtccacatctca
aaactaaagaaaggttttgtgaagcaacccagcgatgtggttgcggtcggggatattgtt
aaagtttgggttgaaagtgtagacgttgaacgccaccgaattcaattaacaatgattcct
aaggattaa
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