Paenibacillus peoriae: ABE82_06885
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Entry
ABE82_06885 CDS
T04053
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ppeo
Paenibacillus peoriae
Pathway
ppeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE82_06885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppeo03019
]
ABE82_06885
03400 DNA repair and recombination proteins [BR:
ppeo03400
]
ABE82_06885
Enzymes [BR:
ppeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABE82_06885
Messenger RNA biogenesis [BR:
ppeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABE82_06885
DNA repair and recombination proteins [BR:
ppeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABE82_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ALA41261
LinkDB
All DBs
Position
1612224..1614122
Genome browser
AA seq
632 aa
AA seq
DB search
MSVQAPTLERAQDLLQKFYGYPDFREGQKKIVASMLEGNDTLGIMPTGGGKSICYQIPAL
LHEGLTIVVSPLISLMKDQVDALTTMGIAAAYINSTLSGREVNDRIRAARNGDLKLLYVA
PERLELDWFRDEMAQLPISCVAVDEAHCVSQWGHDFRTSYLAVAPFVDGLYERPIVAAFT
ATATPQVMDDIVRLLRLRSPETFVTGLGRPNLAFSVLRGEDKRSFLLNYAREHEGESGII
YAATRKDVDDLYQRLRDAGMAAGRYHAGMTDQERADSQEGFLYDDIRVIVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGDPSQCILLFGPQDIVTQKFLIEQNPQDEDR
KRNDYRKLQQMVDYCYTTRCLRTAQLEYFGEAEEHEACGICSSCTDERELVDMTIDAQKI
FSCIHRMRERYGVSMVASVLKGSRNKKVLQYGFDSLPTYGVMGNRTEKEIAEIINVLVSE
GYLMLSEGQYPVVRLQQLAAEVLKGQREVMQRVVRHATAFAGGAGSRGRQGRDAYPAAVN
ETVFEQLRLIRRDLAAQEHVPSYIIFNDATLREMSVASPQSEADMLRIKGVGEVKFRKYG
KPFLDFFQNQGNIGGTVSEDEIYADDVYEDFE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtacaagcaccaacattggaacgggcgcaggacttgctgcaaaaattttatggc
tatcccgatttccgggagggacaaaagaaaattgtggccagtatgctggagggcaacgat
acgttgggcatcatgccgacagggggcggaaaatcgatatgctaccagatccccgcgttg
ttgcatgaggggctgaccattgtcgtgtcaccgctcatctcgctgatgaaggaccaggtg
gatgcgctgaccacaatggggattgctgctgcctacatcaatagtacgttgagtggtcga
gaagtgaatgaccgcatacgagccgcacgaaatggtgacttgaagttgctgtatgtcgca
ccggaacgactggaactggactggtttcgcgatgaaatggctcagttgccaatttcctgc
gttgcggtagatgaggctcactgcgtatcccagtggggccatgatttccgtaccagctat
ctggctgtggctccattcgtggacgggctgtatgaacgcccaatcgtggcggcgtttacg
gcaacggcgacaccgcaggtcatggatgacatcgtgcgcctgcttcgtctgcgctcaccg
gagacgttcgttacaggccttggacggcccaatttggcgttcagtgtgctgcgcggggaa
gacaaacgcagctttttactgaattatgcccgtgagcatgagggtgaatcgggcattatt
tatgcggcgacacgtaaggacgtggacgatttgtatcaacggctgcgtgacgcaggcatg
gcagccgggcgctatcatgccgggatgacagatcaggaacgtgcagatagccaggaaggg
tttttgtacgacgatatccgtgtcattgtagcaaccaatgccttcggcatggggatagat
aaatcgaacgtacgctatgtcattcactacaacatgcctaaaaatatggaggcttacgtg
caagaggcgggacgcgcaggacgtgatggcgacccgagtcaatgtattttgctgttcgga
ccgcaagatattgtgacgcagaagtttctgattgagcaaaatccacaggatgaagaccgc
aagcgcaacgactaccgcaagctccagcagatggttgattattgctacacgactcgttgc
ctacgtacggcacagcttgagtatttcggagaagcggaagagcatgaagcttgcggtata
tgtagttcatgtacagatgagcgggaactggttgatatgaccatagatgcgcaaaagatt
ttttcgtgcattcatcgcatgcgggagcgttatggggtctcgatggtcgcctcggtcttg
aaaggctcgcgtaacaaaaaagtactgcagtatggttttgacagcctgccaacctatggc
gtgatgggcaaccggacggaaaaagaaattgctgaaattatcaatgttcttgtttcggaa
ggctatctgatgttgtccgagggacaatatccggtcgtacgcttgcagcagcttgcggct
gaagtgctgaaaggccagcgagaagtcatgcagcgtgtggtgcgacatgccacggctttt
gcaggtggagcaggttcacgcggacgacagggacgcgatgcatacccggctgcagtcaac
gaaaccgtgttcgagcaattgcgcctgatccgccgcgatctggccgctcaggagcatgta
ccgtcttatatcattttcaatgatgcgacgctgcgtgagatgagcgtagcgagcccgcaa
tccgaggcagacatgttgcggatcaagggtgtcggcgaagtgaagttccgcaagtacggc
aagccgtttcttgatttttttcaaaatcaggggaatatcgggggaacggtaagcgaggac
gagatttatgcagacgatgtgtacgaggattttgaatag
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