Paenibacillus peoriae: ABE82_08365
Help
Entry
ABE82_08365 CDS
T04053
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppeo
Paenibacillus peoriae
Pathway
ppeo03030
DNA replication
ppeo03430
Mismatch repair
ppeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABE82_08365
03430 Mismatch repair
ABE82_08365
03440 Homologous recombination
ABE82_08365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppeo03032
]
ABE82_08365
03400 DNA repair and recombination proteins [BR:
ppeo03400
]
ABE82_08365
Enzymes [BR:
ppeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABE82_08365
DNA replication proteins [BR:
ppeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABE82_08365
DNA repair and recombination proteins [BR:
ppeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABE82_08365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
HROB
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ALA41531
LinkDB
All DBs
Position
1889668..1893345
Genome browser
AA seq
1225 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARTAELVKQASAYGMKALALTDHGVMYGAIPFYRACVENGI
KPIIGCEAYMTAGSRKERGSRKDQPIYHLILLAKNKTGYQNLMKLCSIGHLEGFHYKPRI
DMEALAAHHEGIICLSACLGGEVPQHLLHGREAEARRAAERYRNIFGDDFYLELQDHGLS
EQKRVNPLLIALAKELDIPLVATNDVHYLTEPDADVQDVLICIGTGKTVDDEERLRIPTR
QLYLKSQEDMARLFPHVAEAIANTVRIAEKCELELEFGQSILPEYRPLPEGMTSSSYLRN
LCVQGLERRYGSDPGWEQPEERERLNQRLNYELNTIDSMGFSDYFLIVWDFIAFAHKHKI
ATGPGRGSSAGSLVAYVLNITNVDPMKYNLLFERFLNPERISMPDIDIDFSDERRDEVID
YVVQKYGNEHVAQIITFGTLAARAAVRDVGRVLNVPYGEVDKAAKLIPAQLGINIRHALE
ITPELKTLYETKPKTRELLDMAIKVEGMPRHASTHAAGVVISRTPLTDAVPLQEGSEGVP
LTQYSMENLERIGLLKMDFLGLRTLSIIERCIHWIAEDHGETPDFSRIPDNDPHTYDLLG
KGDTGGVFQLESAGVRRVLKDLKPSVFEDIISVLALYRPGPMGFIPNFIQAKHGQIEISY
PHPDLEPILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDLERGHFV
EGSIKQGYTEEEAGRVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMASMLT
AVMGSHRKVAEYVVECRRMDIAVLPPDVNESGVLFTPLQQGGIRFGLAAIKNVGTQAMES
ILAVRKERPFDSLLDFCRRVDLRVCNKRVIESLIQAGAFDSLTGHRAQLLAMLDETVDAA
VKWRKERDDLQIDMFGFVEMPNWDIEYPNVPQFSASQQLELERELLGLYLSGHPLDDFES
LLESSEADRLMELGDVPDETVVVTAGMVVSLKTITTKQGKAMAFIELEDQIERCEVVLFP
EVWKRSQQWIEKGALLTLRAKMQQQDEHFKLLADETAPLAEDSLARLLQRRRASTRSSAT
AGASVPAAGSAAGGPGGRAPRVSPSPSAATASASPQPKAARPVTAASPRGAEADRGEQVP
VPRSVEPTTRQRVFVKITRHTEEDASLLVSLKALLQEHSGAMPTVLFYESNQRLLALSDA
YNIKPSPQLFDQMESMLGEGTVKVK
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttgtgcatttgcatgttcatagcgagtacagcctgctggacggcgcggct
cgtaccgcggagttggtcaaacaggcatcagcttacggaatgaaggcgctggcccttaca
gatcacggggtcatgtacggtgccattcctttttatagagcgtgtgtagagaacggcatt
aagccgattatcgggtgtgaggcctatatgacggcaggatcgcgcaaggagcgtggcagc
cggaaggatcagcccatatatcatttaattttgctcgccaaaaataaaacaggctatcaa
aatctgatgaagctgtgctccatcggccatttggagggctttcactacaagccgcgcatc
gacatggaggctttggctgcccatcatgaaggcatcatatgcctgagcgcttgtttgggc
ggtgaagtgccgcagcatttactgcatggtcgggaagctgaagcacgacgagcagcggag
cgatatcgtaacatttttggcgatgatttttatctggaactccaggatcatggtctatcg
gagcaaaaacgcgtaaatcctctcttgatcgcactggcgaaggaactggatattccactg
gtggcgacgaatgacgtgcattacttgactgagccagatgcagacgtgcaggacgttctg
atctgtatcgggacagggaagacagttgacgatgaggagcgcttgcgtataccaacacgt
cagttgtatctgaaaagtcaggaggatatggctcgtttattcccgcatgtggcagaagcc
atcgccaacacggtgcgtattgctgaaaaatgcgaactggagctggaattcggtcaatcc
attttgcctgaatatcgtccgctgccggaaggaatgacctcttcttcctatttacgcaat
ctgtgtgtgcaagggctggagcgtcgctatggaagcgatcccggatgggagcagccggaa
gaacgggaaaggctgaaccaacggctaaactatgagttaaataccattgacagtatgggt
ttcagcgattatttcctgattgtatgggattttattgccttcgctcataagcataagata
gcaacgggaccggggcggggttcctcagcaggcagtttggttgcctatgtgcttaacatc
acgaatgtcgatccgatgaaatacaacctgctctttgaacggtttctgaatcccgaacga
attagtatgccggatatagatattgattttagtgatgaacggcgtgacgaggttatcgac
tatgtagtacaaaagtacggaaatgagcatgtagcgcaaattattacctttggaacgctg
gcggcaagagccgctgtccgtgacgtcggtcgtgtattgaacgtgccatatggcgaggtg
gacaaggcagccaagctgattccggcgcagctaggcattaatatccgtcatgcgttggaa
attaccccggagctgaaaacgctatatgaaacgaagcccaagacacgtgaactgctggat
atggcgatcaaggttgaaggaatgcctcgtcatgcttcgacacatgcagcaggtgttgtc
atttcgcggactccattgaccgatgcggttccgcttcaagaggggagtgaaggggtacca
ttgacgcagtactcgatggaaaatctagagcgcattggtttgcttaaaatggatttcctt
gggctgcgtacactctccattattgaacggtgcatacactggattgcggaagaccatgga
gaaacgcctgattttagccgtattcccgataatgatccacatacctatgacttgctgggc
aaaggagatacaggaggcgtattccagctggagtcggccggtgtacgccgggtactcaag
gatttgaagccgagtgtattcgaggatatcatttctgtcctggctttgtatcgtccgggc
ccgatgggatttattcctaactttatacaggccaaacatggtcagattgagatttcttat
ccgcatcctgacctggaaccgatcttaaaggacacgtacggtattattgtgtatcaggag
caaatcatgcagattgcttcgcgcatggcgggtttttccctgggagaagccgatctgttg
cgccgggctgtgtccaagaaaaagcgcgaagtgctggatctggagcgcgggcattttgtc
gaaggcagtatcaagcagggatacacggaggaggaggccggaagggtttacgatatgatt
gtccgttttgctgactacggcttcccgcgtgcccatgcagctgcttatggtgtgctagca
tttcagacggcttatttaaaggcccattatccggtacaatttatggcttcaatgctgaca
gcggtgatgggaagtcatcgaaaagtggctgaatatgttgtcgaatgccgtcgtatggat
atcgcagtgttgccacctgatgtgaatgagagcggggtgctgtttactccgttacagcag
ggaggcatccgcttcggcctggctgcgattaaaaatgtcggcacacaggcgatggagagc
attctcgctgttcgcaaggaacggcctttcgacagcctgctcgatttttgtcgacgtgtc
gatttgcgggtatgtaataagagagtaattgaatcgcttattcaggcaggggcctttgat
tcgttgacgggtcatcgggcacagttgcttgccatgctggatgaaacggtggatgcagcc
gtcaaatggcgcaaggaacgggatgacttgcaaattgatatgtttggttttgtggaaatg
cccaattgggatatcgaatatccaaatgtaccccaatttagtgccagccagcaattagag
ctggaacgtgaactgctgggactgtatttatcggggcatccgttggatgattttgagtcg
ctgttggaaagcagcgaggcggatcgtttgatggagctgggcgatgtccctgatgaaacg
gttgttgtgactgcaggcatggtagtgtcactcaaaacgattacgaccaagcagggtaag
gctatggcctttattgagctggaggatcagattgagcgctgtgaggttgtgctgtttcct
gaggtatggaagcgaagccagcagtggattgaaaagggagctttgcttacgcttcgagcc
aagatgcagcagcaggacgagcacttcaagctccttgcggatgagaccgccccgctggcg
gaagactcgctggcacggctcctccagcgccgacgtgccagtacgcgctcgtccgccaca
gctggagcatccgtaccagctgctggttctgctgctggcggcccaggcgggagagcgccg
cgtgtgtcaccctcgccttcggcagccactgcatctgcttcgcctcagccgaaggcggcc
cgtcccgtgacggctgcttcaccgcgcggagccgaagcggatcgcggtgaacaggtgccg
gtcccgcgcagcgtggagccgaccactcgtcagcgggtgtttgtcaaaatcactcgccat
accgaggaggacgccagcttgctggtcagtctcaaggcactgctacaggagcattccggt
gctatgcctaccgtgcttttttatgagagcaaccagcgtctgcttgcgttgagcgatgct
tacaacattaagccttctcctcagctttttgatcaaatggagtcgatgttgggtgaaggc
acggtgaaagtcaaatga
DBGET
integrated database retrieval system
