Paenibacillus peoriae: ABE82_10095
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Entry
ABE82_10095 CDS
T04053
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppeo
Paenibacillus peoriae
Brite
KEGG Orthology (KO) [BR:
ppeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppeo03032
]
ABE82_10095
03400 DNA repair and recombination proteins [BR:
ppeo03400
]
ABE82_10095
Enzymes [BR:
ppeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABE82_10095
DNA replication proteins [BR:
ppeo03032
]
Prokaryotic type
DNA Topoisomerases
ABE82_10095
DNA repair and recombination proteins [BR:
ppeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABE82_10095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
MACPF_b-prism
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALA41845
LinkDB
All DBs
Position
2264256..2266358
Genome browser
AA seq
700 aa
AA seq
DB search
MADSLVIVESPSKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVENDFNPKYITIRGK
GSILKELKDARKKVKKVYLAADPDREGEAIAWHLAHALELDDTADCRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIILDREN
EINEFVPEEYWTITAKLAIKDSTFEAKFHKLRGEKKELSSEADVQEVLEAIGKSSYKVRD
VKEKERLRNPSPPFTTSSLQQEAARKLNFRASKTMSVAQQLYEGVDLGKEGTVGLITYMR
TDSTRIAASAQEEAKELIIQKYGEAFVPETPRQYSKKAANAQDAHEAIRPTSALRDPETV
KPFMSRDQFRLYKLVWERFMASQMASAIMDTLSVDIEAGETIFRAAGSKVRFPGFMKVYV
EGNDDGKTEEDKLLPPLHPGDKLKKEAVEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFFPTELGELVIEQMEEFFPEILNVEFTANMEGDLDHVEEG
EGNWVKVLSDFYESFEKRLEVAEEEMKEIEIKDEVSDVICDKCGSQMVYKLGRFGKFLAC
SAFPDCRNTKPIVKDIGINCPTCGEGHVVERRSKKGRVFYGCDRYPECDFVSWDKPSIKP
CPSCSSLMVEKRTKQGTKLNCTVCDHSEMLEESDESVETS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcactcgtcatcgtggaatcgccttccaaggcgaagacgatcggcaaatac
ttaggcagcaaatatatcgtcaaggcttccatgggtcatatcagggatttaccgaagagt
cagatcggcgtagaggtcgaaaatgattttaatcccaaatacattaccattcgaggtaaa
ggctcaattctaaaagaattaaaggatgcccgaaaaaaagtaaaaaaagtatatctggcg
gctgacccggatcgcgaaggtgaagctattgcctggcatctggcgcatgcgctggaactg
gacgatacagcagattgccgtgttgtatttaatgaaattacgaagcaggctgtcaaagat
gcttttaaaacaccccgcaaaatcaatatggatttggtcaatgctcagcaggcacgacgg
atactggatcgacttgttggctacaaaatcagcccgttgctctggaaaaaggtaaaaaag
ggcctatccgctgggcgtgtgcagtcggttgcggtgaaaattattttggaccgggaaaac
gagatcaatgagtttgtaccggaagaatactggacgattacagctaaactagctattaaa
gacagtacctttgaagcgaaatttcataagctgcgcggtgaaaagaaagaactctctagc
gaagcggatgtacaagaagtgttagaagctatcggaaaatcgtcctacaaggtacgcgat
gttaaagagaaagagcgtttacgcaatccttctcctccattcacaacaagttccttgcag
caggaggcggctcggaagctcaacttccgtgcatctaaaacgatgtctgtagctcagcag
ctatatgagggtgtggatttaggtaaagaagggaccgtgggtctgattacgtatatgcgt
acggattccacacggatcgccgcttcagctcaagaggaagcgaaagaattaattattcaa
aaatatggcgaagcttttgtacctgaaactcctcgtcaatattcaaaaaaagcggccaac
gcccaggatgcgcatgaagcgattcgtccaacctctgcgttacgcgatccggaaacagtt
aagccgtttatgagtcgggatcagttccgtttgtacaaattggtatgggaacgtttcatg
gccagccagatggcttctgctattatggatactttgtccgtagatattgaagcgggtgag
acgatattccgggcagcaggttctaaggttcgttttccaggtttcatgaaagtgtatgta
gagggaaatgacgacggtaaaaccgaagaagataaactgctgccaccacttcatccaggc
gataaattaaaaaaagaagcggttgagccgaagcagcattttacacaaccgcctccccgt
tatacggaagcgcgactggtgaagacgctggaagaactgggtataggacgtccaagtacg
tatgcaccaacgctggaaaccattcagaaacgtgggtacgttgctattgaagagaagaag
tttttccctacagagctgggcgaattggtcatcgaacagatggaggagttcttcccagag
attctgaatgtggagtttacagctaatatggaaggtgatcttgaccacgtcgaagaaggc
gaaggtaattgggtcaaggtgttgagtgacttttacgagtcattcgagaagcgacttgaa
gtggctgaagaagaaatgaaagaaattgaaataaaagatgaagtatccgatgtcatttgt
gataagtgtggcagccaaatggtgtataagcttggccgatttggtaaattcctggcctgt
tctgcttttccagattgccgtaacacaaagccaattgttaaggatatcgggattaattgt
cctacatgcggtgagggtcatgtcgtcgaacgacggagtaaaaagggacgtgtcttctat
ggatgtgaccgctacccggaatgtgattttgtttcctgggataaaccgtccattaagcct
tgcccaagttgcagtagcctaatggtcgaaaaacgtacaaaacaaggaacgaagctcaac
tgtactgtctgcgatcacagcgaaatgctggaagagagcgatgagagcgtagagacttct
taa
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