Paenibacillus peoriae: ABE82_10345
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Entry
ABE82_10345 CDS
T04053
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ppeo
Paenibacillus peoriae
Pathway
ppeo03030
DNA replication
ppeo03430
Mismatch repair
ppeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABE82_10345 (polC)
03430 Mismatch repair
ABE82_10345 (polC)
03440 Homologous recombination
ABE82_10345 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppeo03032
]
ABE82_10345 (polC)
03400 DNA repair and recombination proteins [BR:
ppeo03400
]
ABE82_10345 (polC)
Enzymes [BR:
ppeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABE82_10345 (polC)
DNA replication proteins [BR:
ppeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABE82_10345 (polC)
DNA repair and recombination proteins [BR:
ppeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABE82_10345 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
T2SSK
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ALA41895
LinkDB
All DBs
Position
2311260..2315576
Genome browser
AA seq
1438 aa
AA seq
DB search
MGGAEEKRKRLELLMKQVVMPTGVVEPYFLDGWIDQVEISRTNKDWNITIAKETLVPAQV
YRTFCIQVQEKMSHIAKITFRFQYSEQIQPSDIISEYWKLFLEWVHREIPSVNGWLNRAV
HEWEDGLLLLTMSDSMSLELARKKQIDQAIIKFYNKYFGLSMRIKVQVGESNQEALQQFQ
EKKMQEEREVIQQMMESMESEMPPLDEEEGDVRLQFGYDIKEPAVPMQDIQDEEKKVTLQ
GTIFGLDSKELRNGSTLFTYYLTDFSDSLQMKMFAKTKEDLKILSLLANGKWVKVRGRVE
YDRFMQIPELVMIPSDLVEVQAPPTRKDKAEEKRVEFHLHTKMSAMDAVASIDQYVKTAA
KWGHKAIAVTDHGGVQCYPDAAKAAKKNGIKMIYGIEANVVNDAVEVVMQAQPLNLKTAT
YVVFDIETTGLSVTQNKIIEIAAVKMHDGKEVDRYATFVNPHERIPYNIQQLTNINDEMV
KDAPDVEPVMKEFVAFAGDAVLVAHNARFDVGFIQATLRNMGLPEMTNPVLDTLELARLL
FPTMKNHRLNTLTTKYKVALESHHRAIDDTVALTEVLNGLLNDAEQIKGLKMLDRLNDYV
GKDLSTVRPFHCCIYALNPIGKKNLYKLVSMSHTEYFKRVPCIPKSKLSEMRDGLLIISG
CEKGEFFEAVLNKSEEEAEEIAQFYDVLEIQPLTMYMHLVEKQLVSGPDALKTAIRKVCE
IGRRLDKPVIATGNVHYLETRDKLYRDITIHGITGFSPLKDIRKPDAHLRTTDEMLAEFE
FLGEEKAYEVVVKNTIELADRFEELELFPDKLFTPLLDGADEEIRNTCYETAKSIYGEEL
PEVVVARLEKELEPIIKYGFSANYLISERLVKKSNKDGYLVGSRGSVGSSVVATFLGISE
VNPLPAHYICGNPECRHSEWILDGSVPSGFDLPDKNCPNCGGKLKGEGQDIPFETFLGFK
GDKVPDIDLNFSGEYQPVAHNYTKVLFGEKSVFRAGTIGTVAEKTAFGFAKKYEEAHHKK
WRGAELNRLASGCTGVKRSTGQHPGGIVVVPDYIEVEDITPVQYPADDTSSEWKTTHFDY
HAFDANLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSMFNSTEALGVTPQQIR
TPVATYGVPEMGTKFVRQMLVESQPSSFADLLQISGLSHGTGVWLGNAQELIKNNTCNIK
TVIGCRDDIMLFLIYKAGMDAGLAFKITESVRKGKGLSAEWIEEMKKCKVPQWYIDSCLK
IQYMFPKAHAAAYVISAVRTAYFKLYHPIEYYATYFSVRAADFDIELCCQGYDAIARKIV
EIEQLGFQAPPKEKGMLPILEMALEMTARGFSFKSIDLYRSEATRFKVDGDSLIPPFGAL
QGIGDNAARNIAASREQGEFLSVEDFQQKSKASKTIVEMLSQLGCFRGLPESNQLSLF
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagctgaagaaaagagaaagcggctggaactgctgatgaagcaggttgtgatg
ccgacgggagtggttgaaccttattttttggacggttggattgatcaagtggagattagc
cgtaccaataaggattggaatatcactattgccaaggagacactggtccccgctcaggtg
tatcgtacgttctgtattcaagtacaggaaaaaatgagtcacatcgcaaaaattacgttc
cgttttcagtatagtgagcagattcagccaagtgatatcattagtgaatactggaaactt
tttctagagtgggtacatcgtgagattccttctgttaacggttggttgaatcgggctgtg
catgagtgggaagacggtctattattgctaacgatgagcgacagtatgtcattggaactg
gcgcgtaaaaagcagatagatcaagctatcatcaaattttacaataaatatttcgggctc
tctatgcgcattaaagtccaggtgggtgaaagtaaccaggaggcattacagcaattccaa
gagaagaagatgcaggaagaacgcgaagttattcagcagatgatggaaagtatggaatcc
gaaatgccgcctttggacgaagaagaaggagacgtacggcttcaatttggttatgacatc
aaagaaccggctgttccgatgcaagatattcaggacgaagaaaagaaagtcaccttacaa
gggacaatcttcggtttggatagtaaagaattgcgcaatggcagtacgttgtttacgtat
tatttgaccgactttagtgattccctgcaaatgaaaatgtttgctaaaactaaagaagat
ctgaagatcctcagtttgttggctaacgggaaatgggtcaaagtgcgggggcgagttgaa
tatgatcgttttatgcaaattcccgagctggttatgattccttccgatctagttgaagta
caggctccacccacacgtaaggataaggcagaggaaaaacgggttgagttccatctacac
acaaagatgagtgcaatggatgctgtcgcctcgattgatcaatacgtcaaaacagccgcc
aaatgggggcacaaagcgattgcggtcaccgatcacggtggtgtgcaatgctatcctgac
gcagcaaaagcagcaaagaaaaacggaattaaaatgatctacggtattgaggctaacgtg
gttaatgatgccgttgaggttgtaatgcaggcacaaccattaaatttgaaaacagcgact
tatgtcgtttttgatattgaaaccaccggtttatcggttacacagaataaaattattgag
attgcggctgtaaaaatgcatgatggcaaagaagttgatcgttatgctacctttgtcaat
ccgcatgagcgtataccctacaatatccaacaactgaccaacattaacgatgaaatggtc
aaggatgcgccggatgtagaacctgttatgaaggagtttgtagcttttgctggcgatgct
gtattggttgcccataatgcgcgatttgatgtcggctttatccaggccacccttcgaaat
atgggcttgcctgaaatgaccaatccggtactggatacgctcgaactggctcgtttactg
tttccaacgatgaaaaaccaccgtctgaatacgctgacgaccaaatataaagtggcgctc
gaaagccatcatcgggccattgacgatacagtcgcactgactgaagtgctgaatggcttg
ctgaatgatgcggaacaaattaagggtttaaaaatgctcgatcgtctgaatgattatgtg
ggtaaggatttatcgaccgttcgtccttttcactgctgtatttatgccctcaacccgatt
ggtaaaaaaaatctgtacaagctggtttcgatgtctcataccgaatatttcaagcgtgtg
ccttgtattcctaaatcaaaattgtcagaaatgagagacgggttgcttattatttctggc
tgcgaaaaaggagagttcttcgaggctgtgttgaacaagtccgaggaagaggccgaggaa
attgcacagttttatgatgtgttggagattcagcctttgacaatgtatatgcatctagtg
gaaaagcaattggtaagtgggcctgatgctctgaaaacggcgatacgcaaagtatgcgaa
attggtcggcgacttgataagcccgtaattgccacaggtaatgttcactatttggaaact
cgcgataagctgtaccgtgatattacgatacacggcattacgggatttagcccgctaaaa
gatattcgtaagccagatgcgcatttacgcaccacagacgaaatgctggcagaattcgag
tttttgggcgaggagaaagcctatgaagtcgttgtgaagaataccattgagctggcggat
cggtttgaggagctggagctgttccctgacaagctgtttacacctttgctggatggggcg
gacgaggaaatccgcaacacttgctacgagacggctaaatccatctatggtgaggaattg
cccgaggtggttgtagcccgccttgaaaaagaactggagccgattattaaatacggtttc
tctgccaattatctcatttccgagcgtctggttaaaaagtctaataaggatggatatctg
gtaggttcacggggttctgttggatcttctgtggtcgctacctttctcggaatttccgag
gttaatccactgcctgcacattatatttgtggtaatcctgaatgcagacatagcgaatgg
attttggacggtagtgtgccgagtggatttgacttgccagacaaaaactgtccgaactgt
ggtggcaaattgaagggtgagggacaggatattccgtttgaaacgtttcttgggtttaag
ggagataaagttcccgatattgacttgaacttctctggcgaatatcagcctgtcgcacat
aactatacgaaagtattgtttggtgagaaaagtgtatttcgtgctggaaccataggtaca
gttgccgaaaaaactgcttttggctttgcaaagaaatatgaagaggcgcatcataaaaaa
tggcgtggggctgagctgaacaggctggcttcgggctgtacaggggtcaaacgcagtacc
gggcaacatccaggcggaattgtcgttgttcccgattatattgaggtcgaggatattacg
ccggtacagtatcccgccgatgatacaagctcagaatggaaaacaacgcattttgattat
cacgcttttgatgcgaatttactcaaactcgatattctgggtcatgatgatccgaccatg
atgaggatgcttcaggatttgaccggtgtcgatcctacgaccattccaatgaatgatcct
aaggtgatgagcatgttcaactccacggaggcgctcggtgtaacaccccagcaaatccgc
acgcctgtagcaacctatggtgtaccagagatggggacgaagtttgtacgccaaatgcta
gtagagtcgcagccaagttcttttgctgatttactgcaaatatccggactgtctcacggc
acgggcgtatggctggggaatgcacaggaactgattaagaataatacctgcaacatcaag
actgtaattggttgccgtgacgatattatgctgtttctgatttacaaggcagggatggac
gcaggtctggcctttaaaattacggagagcgtacgtaaaggtaaggggcttagtgctgaa
tggattgaggaaatgaaaaaatgcaaagtgccacagtggtacattgattcttgtctgaaa
atccagtacatgtttccgaaggcgcatgctgcagcctatgttatttcagcagtgcgcaca
gcgtactttaagctgtatcatccgattgaatattatgcgacttacttttcagtacgtgca
gccgattttgatattgagctgtgctgtcagggatatgatgcaatcgcgcggaagattgtc
gaaatcgagcagctcggctttcaggcaccgcccaaagaaaaagggatgcttccgatccta
gaaatggctctggaaatgacggctcgcgggtttagttttaaatccattgatttgtaccgt
tccgaagctacacgcttcaaggtcgatggagattcactcattccgccattcggagctctt
cagggaattggagacaatgcagcacgtaacatcgcagcctcccgtgaacagggtgaattt
ttgtctgtcgaggattttcaacaaaaatcgaaggcaagtaaaaccattgtcgaaatgcta
tcccagttgggatgctttcgaggtttgccagagagtaatcagctgtctctgttttaa
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