Paenibacillus peoriae: ABE82_10525
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Entry
ABE82_10525 CDS
T04053
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ppeo
Paenibacillus peoriae
Pathway
ppeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABE82_10525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppeo03019
]
ABE82_10525
Messenger RNA biogenesis [BR:
ppeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABE82_10525
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
HDOD
KH_2
Motif
Other DBs
NCBI-ProteinID:
ALA41928
UniProt:
A0A0K2F7P9
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Position
2353605..2355149
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AA seq
514 aa
AA seq
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MMTAIWFVLVAVAALFFGFGIGYFIRKSIAEAKISSAEEAAAQIVENAKKEAEALKKETV
LEAKDEIHRIRAEAEKETRERRNEIQRQERRLLQKEESLDKKLESLERKEEQVANKEKRI
DETQQQIDLIYKSQVTELERISNLTMEDARSIILTNVEQEVRHETAQMIKEIEQQAKEEA
DKKSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLII
DDTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQA
TFEVGVHSLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAGELGEDVVLARRAGL
LHDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADAL
SAARPGARRETLETYIRRLEKLERISESFEGVEKSYAIQAGREVRVMVQPEKIDDAEAFR
LARDITKTIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgcgatctggttcgttctcgttgctgtagccgcgttattctttgggttcggg
attggttattttattcgcaaatctattgcagaagctaagatctccagtgcggaagaagct
gccgcgcaaatcgtggagaacgcgaaaaaagaggcagaagcgctgaagaaggaaacggta
ttggaagcgaaagatgaaatccaccgcatccgtgccgaagctgaaaaagaaactcgtgaa
cgtcgcaatgaaattcaacgacaggaacgaagattgctgcaaaaagaagaatcgctggat
aaaaaattggaatcgctggaacgcaaagaagaacaagtggccaacaaagagaaacgaatc
gatgaaacccagcagcaaattgatttgatttacaagagtcaggtaactgagttggaacgt
atttccaatctgacgatggaggatgcaagaagtattattctgaccaacgtagagcaggaa
gttcgtcatgaaacagctcagatgattaaagaaattgaacagcaggccaaagaagaagcg
gacaaaaagtctcgtgaaatcatcacactggccatccaacgctgtgcggcagatcatgta
gcagaaacgacggtttctgttgtcacattgccgaacgaagaaatgaaaggccggatcatc
gggcgcgaaggccgtaatatccgtgcacttgaaacccttacaggaattgacctcattatt
gatgatacgccggaagctgttattttgtctggatttgatccgattcgtagagagattgcg
cgtactgcgcttgaaaagctcgtagcggacggacggatacatccggctcgtattgaagag
atggtggaaaaatcccgtaaagaggtggacgaacgaatccgtgagtatggtgaacaggcc
acctttgaggtgggcgtgcatagcttgcatccagatttgatcaagatcttgggacgtctc
aagttccgtacaagttacggacagaacgtattgaagcactcgatggaagttgcatacttg
acaggtctgatggccggggaactgggcgaagacgttgtactggcaagacgggcaggattg
ctgcatgacatcgggaaggcgctggatcatgaagtggaaggatcgcacgttgaaattggc
gtggagctggcgaagaagtacaaggaacacccggtcgtcatcaacagcattgcctcacat
cacggtgactgcgaagcgacttcagtgatcgccatgctggttggggcggcagatgccctg
tcagcagcaagaccgggagcgcggcgtgaaacgctagagacgtacatccgtcgtcttgag
aagctggaacgcatctccgaatcttttgaaggcgttgaaaaatcatacgcgattcaagcc
ggacgcgaagttcgtgtcatggtacagccagagaaaattgatgatgcggaagcattccga
ctggcccgcgatattacgaaaacgattgagaatgaactggactatccgggacatatcaag
gttaccgtcatacgcgagacccgtgccgtagaatacgcaaaataa
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