Paenibacillus peoriae: ABE82_19110
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Entry
ABE82_19110 CDS
T04053
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ppeo
Paenibacillus peoriae
Pathway
ppeo03410
Base excision repair
ppeo03430
Mismatch repair
ppeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABE82_19110
03430 Mismatch repair
ABE82_19110
03440 Homologous recombination
ABE82_19110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeo03400
]
ABE82_19110
DNA repair and recombination proteins [BR:
ppeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABE82_19110
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABE82_19110
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABE82_19110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALA43487
LinkDB
All DBs
Position
complement(4488591..4490987)
Genome browser
AA seq
798 aa
AA seq
DB search
MLHSQYRWKTPEANLEAAQLLTEELGISPLLSRLLVNRGVTTAGEANRFLYGSVDDVHDP
FLLLGMKEAVPRIRQALERGEHILIYGDYDADGVSSTSLMIQLMRFLKASYDIYIPHRSN
EGYGLHNHALDWAHQQGVTLVITVDTGISAVEQIIYATSLGIDVIVTDHHEPPAVLPEAY
TLINPKLPGCPYPFKGLAGVGVALKLAQALLGEVPEEWFEIAAIGTVADLMPLHGENRTM
VRRGIQSMRNSAFPGIRALLHVAGVDISTVTSVNIAFALAPRINASGRLDHAGRAVSLLT
TEKEEEADQLAHALDLLNRERQQVVERIVEQAEQQLASKLNGGKLPSVIVLAGEGWNVGV
VGIVASKLLDRYYRPTIILGIDAETGMCKGSARSIPALDIYSALTDSHELMEHFGGHPSA
AGMTLSRDNLELFEEQLNRYAGSILTPEDLIPVAEADMVCRLDEVSLQVVEELELLQPFG
MGNPSPRFVLQGLQLREARKMGREKNHVKLLLEQNGLSLDAIAFRRGDLADFLQQQTEID
LLGELSINEWNGKRSLQLMMQDIRVQEPQIFDYRGVSDPFAELERGLKIFHPRIEERKKD
VAVLIHPSSRLRPSGSVDAESLWLYDKDGSVIPSDGQRDAQHSVKSLFVLEPPDTPDQFQ
ALWSTFENVENVFLLHSVSERGGRLVSPDRELFKRIYVVLSRMGTQPIDEKAMLPALSRQ
CSCSVRMLSKVLDIFEELEFMTRTDGQFCFVSNPPKRDLTASPRYQELYNMAEMEKYLLD
ADTTQMTSWIMSLMKGAS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
ttgcttcattcgcagtacagatggaagaccccagaggctaacctggaagcggctcagctg
ttgacagaagaactggggatttcaccattgttgtcccggcttttagtgaaccggggcgtc
actaccgccggggaagcaaaccgctttttgtacggaagtgtggacgatgtacacgaccct
tttctgcttcttggtatgaaagaagccgtgccgagaattcgccaggctctggaacgtggc
gagcatatattaatctatggcgattatgatgcggacggcgtatccagtacatcattgatg
attcagctcatgcgttttctgaaggcttcttatgatatttatattccccatcgttctaat
gagggatatggtctgcataatcatgcccttgattgggctcatcagcagggagttacgctg
gtcattacggtagatacgggaattagtgcagtagagcaaattatttatgcaacttccttg
gggatagatgttattgtgacggatcatcatgagccgcctgctgtacttcccgaggcatat
actttgattaatccgaagctacccggttgcccatacccatttaaaggtcttgcaggtgtt
ggtgttgccctgaagctcgcccaggcgctgttgggtgaggtgccggaggaatggtttgaa
atcgccgctatcggcacggtagccgatctgatgccactacatggtgaaaatcggacgatg
gtacgcagagggattcaatccatgagaaactctgcatttccgggtattcgtgcgttgctc
catgtagcgggcgtggatatatctacagtgacttcagtcaacatcgcatttgcattggct
ccgcggattaatgccagcgggcgcttggatcatgcgggacgagcagtttctctgctgacg
acagaaaaagaggaagaagcagatcaacttgcgcatgcgctggacctgctcaatcgtgag
cgtcaacaggtggtcgaacgtattgtggagcaagccgagcaacaattggcatccaaactg
aatggaggcaagcttccgtcagttattgtgttagctggtgaaggctggaatgtcggcgtt
gtcggaattgtggcatccaagctattggatcgttattatcgaccgaccattattcttggt
atagatgctgagacaggcatgtgcaaaggttctgcccgttctattcctgcattggatatt
tacagtgctcttacggacagccatgagcttatggagcattttgggggtcatccttcggct
gcgggtatgacgctgtcccgtgacaatctggaattgtttgaagagcagctgaaccgctat
gcgggttccattctgacaccagaagatctcattcctgtagctgaagctgatatggtctgt
cgtttggacgaggtatctttgcaagtggttgaagaactggagttgcttcagccttttggt
atggggaatccttctccacgattcgtattacagggactgcaattgcgtgaagctcgtaaa
atgggacgtgagaaaaatcatgtgaagctcttgctggagcagaacggtttatcgctggac
gcgattgccttccgtcgtggcgatttggctgattttttacagcaacaaacggagatagat
ctgctgggtgaattgtcaattaacgaatggaacggtaaaaggtctctccagctaatgatg
caggacattcgagtgcaggagccgcaaatttttgattatcgtggagtgtcggaccctttt
gccgaattagagcggggactcaagatctttcatccacgcatagaggaaaggaagaaagac
gttgcggtgttgatccacccgtcatctaggcttcgtccctcgggctccgtggatgctgaa
tccttatggttgtacgataaagatggcagcgttattcccagtgatggtcaaagagatgca
cagcactctgtaaagtcgctgttcgtactagagccgccggatacaccggatcagtttcag
gcattatggtctacctttgagaatgtagagaacgtatttctccttcattcggtcagtgag
cgtggcggtcgactcgtaagccccgacagagagctgttcaagcgtatttacgttgtgctt
tcccgaatggggacacagcctattgatgaaaaagcaatgctgcctgctcttagccgacag
tgctcctgttcagtacgcatgttatccaaagtgttggacatcttcgaagaacttgagttt
atgacgcgtacagatggtcaattctgttttgtatccaatccgcctaagcgggatttaaca
gcttctccacgatatcaggaattgtataatatggctgagatggagaagtacttgttggat
gcggacactacccagatgacgagctggattatgtcgcttatgaagggtgcgtcttga
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integrated database retrieval system
