Prunus persica (peach): 18766889
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Entry
18766889 CDS
T03092
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18766889
03036 Chromosome and associated proteins [BR:
pper03036
]
18766889
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18766889
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
18766889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Tex_central_region
Spt6_S1
HHH_9
HHH_3
Motif
Other DBs
NCBI-GeneID:
18766889
NCBI-ProteinID:
XP_020425175
LinkDB
All DBs
Position
G8:complement(19567030..19579386)
Genome browser
AA seq
1521 aa
AA seq
DB search
MWDINFVSKEWGESALFYWSLLVLFLTFSHPLTEKMQAENIPTTAITRILSLKKNVWQRR
RRRRLEVMGKADENEDEVMLEEDNDVEETIHGDDEEDDEDEELDEYEKDDFIVDDVDDEQ
EDPEEEEEEEDRADSDEEERQKKKKRKKREEYVLDEDDYELLEDNNVFAPRRKGKFKRLK
KAQRHNERDLGVSDEEEFDGNGKSGRSAEEKLKRSLFGDDEGLPLEDIAEEEEPAEEEDD
REVDEEDEMADFIVDEEFDATGVPVRQKKLKRKKFREAPGVSSSSLHEAHEIFGDVDELL
QLRKQGSDSNECRDRKLEDEFEPSVLSEKYMTEKDDQIRELDIPERIQIYEESTGSPPLD
EISIEDESTWIYNQLTSGTIPLYGKEGLGSSISRGDINKFLELHHKFKLEIPCIAMYRKE
CLSFLKDENQDQNEKPPKIKWHKELWTIQDLDRKWLLLQKRKSALQSYYKRFKCTVNHQL
LESVITSLEASESEREVDDADAKFNLHFPLGEIGADEGQYKKPKRKSLYSICSKAGLWEV
ANKFGYSSEEFGMQLSLEKMRRDVGDELENPKETPEEMASNFTCAMFETPEAVLKGARHM
AVVEISCEPCVRKYVRNNYLDSIEVSTSPTPDGNIAIDGSHQFAGVKWLQRKPLNRFEGA
QWLLIQKAEEEKLLEVTLKLPEDRLNKLISDFNEYYLSDDVSKSAQVWNEQRKLILRDAI
FNFLLPAIEKEARSLLTSRAKNWLRVEYGKVLWNKVSVGPYHRKENDSSSDGEAAPRVMA
CCWGPGRPATTFVMLDSSGEVVDVLYAGSLTLHSHDVNDQKLKKNDEERVLKFMIDHQPH
VTILGCVNLSCTRLKEVIHEIYNKMIVEHPRDVGYDMDDLSIVYGDESLACLYENSRISS
DQLHVQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNAFEHFLTPDEKYAMVEQ
VMVDVTNQVGLDVNLAASHEWLFAPLQFISGLGPRKAASLQRSLVRSGAIFSRKDFLTEQ
GLGLKVFVNASGFLRVRRSGLAASSNQFIDLLDDTRIHPTESYSRAQELAKDVYDQEGGN
DDDEDAMEMAIEHVRGHPKYLKGLDIQSYAKSKKHEDKENTLWDIKRELIHGFQDWRKKY
EEPSQDEEFYMISGETEDTLAAGRIVQATVRRVQAEQAQLALESGLTGMLLKEDYYPGDW
RDVSDLSDKLHVGDILTCKIKSVQKNWYRVLLVCSESEIRNDCSQNIQNLDTYYHKDWRS
LQSEQEKSQKGKQLAKKNFKPRMIVHPRFQNIYADEAMELLSAKDAGESIFRPSSRGPSH
LTLTLKVYDGVYAHKDIVEGGKEPKDVTSLLRIGKTLTIGEDTFEDLDEVMDRYVDLLVA
HLKAMLNYRKFRRGTKAEVDELLWLEKLEYPMRIAYCFGISHEHPGTIILTYIRSANPHH
EYVGVYPKGFKFRKRMFEDIDRLVAYFQRHIDDTRLESGPSIRSVAAMVPMRSPATGGSS
GASLGSGWDGSTNEGGWRGQS
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacatcaattttgtatccaaggaatggggggagtctgcattattttactggtca
ctccttgtgctgttcttgacattctcacaccctcttacagagaagatgcaggcagaaaat
atacctactaccgcaattacccgtatactgtctttgaagaagaatgtttggcaaagaaga
agaagaagaagactagaagtcatgggaaaagctgacgaaaacgaagatgaagtcatgctt
gaagaagataacgacgtggaggaaaccattcacggcgacgacgaggaagacgatgaagac
gaagagctagatgaatatgagaaggacgattttatagtagatgatgttgatgatgaacaa
gaagacccggaggaggaggaggaggaagaagacagagcggacagtgatgaagaagaaagg
cagaagaagaagaaaagaaagaaaagggaggagtatgtccttgacgaagatgactatgag
ctcttggaggacaataatgtgtttgccccccgcaggaaggggaaatttaagcggctgaaa
aaagctcagaggcataatgaaagggatcttggtgtatctgatgaggaggagtttgatggc
aatggtaaaagtggaagaagtgcagaggagaagcttaagcgctccttatttggtgatgat
gaaggtcttccacttgaggacattgctgaagaggaggaacctgcagaagaggaagatgat
agagaagttgatgaagaggatgaaatggcagactttatagtcgatgaagaatttgatgcg
actggagttccagtgagacagaagaagcttaagagaaaaaaatttagggaggcaccagga
gtatcatcctcttctttgcatgaagcacatgaaatatttggtgatgttgatgagttactg
cagctccgcaagcaaggttcagattccaatgagtgtagggataggaaacttgaagatgaa
tttgaaccaagtgttctttctgaaaagtatatgacagagaaggatgaccagattcgggag
cttgatattccggaaagaattcagatatatgaggaaagcaccggatctcctccactggat
gaaattagcatagaagatgagagtacctggatatataatcaacttacaagtggtacaata
cctttgtatggcaaggaaggcttggggagttctataagcaggggtgacatcaacaaattt
ttggaattgcaccacaagttcaagctggagattccctgtattgctatgtatcggaaagaa
tgcctaagctttttgaaagatgaaaatcaggatcaaaatgagaaaccacccaagataaag
tggcacaaggaactttggacaattcaggacttggacagaaaatggctgctacttcagaag
cgaaaaagtgctttgcaatcttactataaacgatttaaatgcactgtgaaccatcagctt
ttggaatcagttataacgtcgctcgaggcttctgaatccgagagagaagttgatgatgct
gacgctaagtttaacttgcatttccctctgggtgagataggtgcagatgagggacaatat
aagaagcccaagaggaaatcactttatagtatctgcagcaaggctggcctgtgggaggtt
gcaaacaagtttggttacagctctgaggagttcggaatgcaattatcactagaaaaaatg
agaagggatgtgggggatgagttggagaatcctaaggagacaccagaggagatggcttca
aactttacgtgtgcaatgtttgagacacctgaagctgtgctcaaaggagctaggcatatg
gcagtggttgagataagttgcgagccatgtgtcaggaagtatgttcgaaacaactacttg
gattctattgaggtatctacaagcccaacacctgatggaaatattgcaatagatggttct
catcagtttgcgggggtgaagtggttgcaaagaaagccattgaatagatttgagggtgca
cagtggctgcttatccagaaggctgaagaggagaagcttcttgaagttactcttaagctg
ccagaagacagactaaacaagttgataagcgactttaatgagtattatcttagtgatgat
gttagtaaatctgcacaagtgtggaatgagcagcggaagttgatactgcgggatgccatt
tttaattttcttctacctgcaattgaaaaagaagcaagatccttgttgactagtagagca
aaaaactggttacgagtggaatatggaaaggttttgtggaataaagtatccgtggggcct
tatcaccggaaggaaaacgatagtagctcagacggtgaagctgcaccccgggtcatggct
tgctgttggggccctgggaggccagctaccacttttgtgatgttagattcatctggagag
gtggtagatgtactttacgctgggtccctcactttacattcccatgatgtcaatgatcag
aaacttaagaaaaatgatgaagaacgcgttttgaagttcatgattgatcaccaaccacat
gtcaccatcctaggatgtgttaacttgtcttgtactcgcctgaaagaagttatccatgag
atatataataagatgatagttgagcatccaagagatgtcgggtatgatatggatgaccta
agcattgtatatggggatgaatctttggcttgcctatatgaaaattctcggatttcatct
gatcagctacatgtgcaatcaggcattgtcaagagggctgtggctcttgggcgttatctt
caaaatccattagcaatggttgccacactttgtggaccaggaagagaaatcttatcttgg
aaactcaatgcttttgagcactttctcaccccagatgagaagtatgcaatggttgaacaa
gtcatggtagatgttacaaaccaggtaggcctcgacgtgaatttggctgcaagccatgaa
tggttatttgcacctttgcaattcatttctgggcttggacctcgaaaggcagcctctttg
cagaggtcattggtaagatctggtgcaatatttagtcgaaaggactttttgacagaacaa
gggcttggtttaaaggtgtttgttaatgctagtggtttcctgcgtgttcggcggagtggg
ttggctgctagcagcaaccaattcattgatctattggatgatacgagaattcatccaaca
gaatcttatagtcgtgcacaagaattggcaaaagatgtttatgatcaggaaggtggcaat
gacgatgatgaggatgctatggagatggctatagagcatgtccggggtcatcctaaatat
ctgaaaggcctcgatattcaatcatacgctaaaagcaaaaagcatgaggataaggaaaat
acattgtgggatataaagagagaattaatacatggttttcaggattggcgtaaaaaatat
gaagaaccaagccaggatgaagagttctatatgatatcaggtgaaactgaggataccctt
gctgcaggaagaattgtgcaagccacagttcgaagggtgcaagctgaacaggcacaactt
gctcttgaatctggattgactggtatgcttctgaaagaagactattatccaggtgattgg
agggatgtttctgacttatctgacaaactgcatgtgggtgacattctcacttgcaagatc
aaatctgttcaaaagaattggtatcgggtattacttgtttgcagtgagagtgagattaga
aatgactgctctcagaacattcagaatcttgatacttattaccataaagactggagaagt
ctacagagtgagcaagaaaaatctcaaaagggaaagcagcttgcgaagaagaatttcaag
ccaaggatgattgttcatcctcgcttccagaatatatatgcagatgaagcaatggagtta
ttgtctgcaaaggatgctggggaaagtatttttcgtcctagttctcgagggccttcgcat
ttaaccttaactctcaaggtttatgatggggtttacgctcacaaagacatagttgaaggt
ggaaaggagcctaaggacgttacaagcttactccgtattgggaagaccctgacgattggt
gaggacacttttgaggatttggatgaggtgatggatcgttacgttgatctgttggtggct
cacttgaaggcaatgctaaactatcgcaagttcaggaggggaacaaaagcagaagttgat
gaacttttgtggcttgagaaattggagtatcctatgaggatagcttattgtttcgggata
tcgcatgaacatccaggcactatcatcctgacctatatccggagtgcaaatccgcaccat
gagtatgttggtgtttatcccaaggggttcaagttcagaaaaagaatgtttgaggacatc
gatcggcttgtagcatatttccagcgccatattgatgacactcggcttgagtcaggacca
tccattagatcagttgctgctatggtgccaatgcgaagcccagcaactgggggttcttca
ggggcatctctgggcagtggttgggatggttcaaccaatgagggtggttggagaggccag
tcttga
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integrated database retrieval system
