KEGG   Prunus persica (peach): 18767115
Entry
18767115          CDS       T03092                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pper  Prunus persica (peach)
Pathway
pper03030  DNA replication
pper03410  Base excision repair
pper03420  Nucleotide excision repair
pper03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    18767115
   03410 Base excision repair
    18767115
   03420 Nucleotide excision repair
    18767115
   03430 Mismatch repair
    18767115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pper03032]
    18767115
   03036 Chromosome and associated proteins [BR:pper03036]
    18767115
   03400 DNA repair and recombination proteins [BR:pper03400]
    18767115
DNA replication proteins [BR:pper03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    18767115
  DNA Replication Termination Factors
   ELG1-RFC complex
    18767115
Chromosome and associated proteins [BR:pper03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    18767115
DNA repair and recombination proteins [BR:pper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     18767115
  Check point factors
   HRAD17(Rad24)-RFC complex
    18767115
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 nSTAND_NTPase5 Mg_chelatase AAA_lid_RFC1 Rad17 AAA_16 Viral_helicase1 RCF1-5-like_lid RuvB_N AAA_11 AAA_5 nSTAND3 AAA_assoc_2 AAA_25 AAA_19 AAA_28 DNAX_ATPase_lid ABC_tran MeaB AAA_30 AAA_24 bpMoxR IstB_IS21 RNA_helicase AAA_18 AAA_3 AAA_7 KTI12 NTPase_1 SLFN-g3_helicase DO-GTPase1 SRP54 AAA_29
Other DBs
NCBI-GeneID: 18767115
NCBI-ProteinID: XP_007200386
UniProt: M5W470
LinkDB
Position
G8:complement(3963013..3966330)
AA seq 332 aa
MASSSSSSSSAYDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRL
MIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLH
VKNMVCNVLEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGF
AHMRICDGVGSYLQLCGLLAKLSLIRETAKAT
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgtcgtcttcttcttcttcgtcatcagcctacgacataccatgggtggagaagtac
aggcccagcaatgtcgccgacattgtgggcaacgaagacgccgtgtctaggctccaggtc
atcgcccgcgacggcaacatgcccaacctcatcttggccggtcctcctggaactggtaag
accactagtatactcgctcttgcgcatgagctcttgggaccaaattataaggaggctgtt
ttagagctgaatgcatcagacgacaggggaatagatgttgtgaggaacaaaattaaaatg
tttgctcaaaagaaagtcacattgcctcctgggcggcataaagttgtcatcttggatgaa
gctgacagtatgacatctggagcacaacaagctttgaggcggacaatggaaatatattca
aattccactcgttttgctcttgcgtgcaatgtatcttccaaaattattgagcctattcag
agtagatgtgcccttgtccgattttctagattatctgatcaggagatacttggtcgccta
atgatagtggttcaagctgaaaaggttccttatgttccagaaggtcttgaagccattatt
ttcactgctgatggtgatatgaggcaggcactgaataatctgcaagctacaaacagtgga
ttccggtttgtcaaccaagaaaatgttttcaaggtctgtgaccagcctcatccattgcat
gtaaagaatatggtgtgcaatgtgcttgaagggaaatttgatgatgcttgttcaggtctc
aagcagctctatgatttgggctactccccaactgacataatcactacctttttccgtatc
ataaagaattatgatatggctgagtatttgaaattggaattcatgaaagaaacaggtttt
gctcacatgagaatctgtgatggagttggctcctaccttcagctgtgtggtcttctggct
aagctttccctaattcgtgagacagctaaagcgacataa

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