Prunus persica (peach): 18767331
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Entry
18767331 CDS
T03092
Name
(RefSeq) endoribonuclease Dicer homolog 3a
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18767331
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18767331
microRNA pathway
RISC loading complex
18767331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
DEAD
ResIII
PAZ
DND1_DSRM
DSRM_DHX29
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
18767331
NCBI-ProteinID:
XP_020409179
LinkDB
All DBs
Position
G8:19052653..19061327
Genome browser
AA seq
1674 aa
AA seq
DB search
MEHSHPEMGLTALDHSPEKTQSPPNPNHFIPRSYQVKVFEVAKRKNTIAVLETGAGKTMI
AVMLIKHISKDMIKSNGKRKLMIFLAPTVNLVTQQSKVIKDSTTLEVGDYYGAKGVDEWS
RSCWEMEVQTHDILVMTPQILLDALRNAFLSLEMFCLLIFDESHRATGNHPYTKIMKEFY
HTSGNRPKIFGMTASPVIRKGVSSTMDCENQISALESILDSQVYAIEDRAEIEAYIPSTV
QTCRFYEKTWLLMNLGLKGEMEALWSKYASMLELQREVPSQYQYYQDIDDKIKMLRKRMS
NDYMKILYCLNDLGLICAYEAVKVCLENAFDVEEESQFYRGSSLKLKYFLDEVLHIIEGF
LQPSNNICTDFEFDYIKAHDLGYISPKLHELLQIFQSFGSGSQVPCLIFVERIITANVIE
RYVKKVPCLSHFTVSYLTGSNKSVGAVAPKLQKETLESFRSGKVNLLFATDVVEEGIHVP
SCSCVIRFDLPKTVRSYVQSRGRCRTSDSQFILMLERGNKKQIDQVFDIIRSEYSMTETS
RNRDPEVCILRNCNFEETKVYYVNATGASVTADSSVSLIHRYCEKLPGDKYFIPKPTFDF
EMSEGLYQCKITLPPNAVFQTTVGPLSSNTHLSKQLVCLEACKMLHEMGALDDHLLPLIK
EPLENDLITKSKESSAGAGTTKRKELHGTTCIRALCGTWGEKLDGEIFEAYKFDYFCNIN
ETYSGFVLLIESKLDNDVQNIEVDLQLISRMVKSSVSSCGKMHLSAKEVMQAKCFQEFFF
NGLFGRLFLGSESEGTKREFLLQTETKSLWSSSYMYLLLPIETLDTSNTNPWRVNWIGIS
SCANVVEFLKKNYSVGPEHFNGDQGNLSLSMTGSSMTECMASDLIHFANTSIDFHNLQNL
LVLATHTGRIYSIVEVISSESAESPFEETVDAASLEYSYAEYFKTKYGIVLVYPGQPLLR
LKQSHNPHNLLGAEGAASKDGHSAEIKPQAHVHMPPEVLVSIDFRVDVLRSFYLLPSLMY
RLESLMLASQLREEINGKSGNIKISSSLILQALTTLRCCENFSLERLEFLGDSVLKYVVS
SHLFLKYPEKHEGQLTARRTRAICNANLHKLGTERNIQGYIRDGAFEPRRWAAPGQHSRF
PDPCKCGVNTLEVPLDSRFQTKAPVKVGKFCDRGHRWMNSKTIADCVEALIGAYYVGEGL
FAALHVMKWLGIDSELEFSLTIEAITRASLRSYIPKNDQIAALESKLGYKFSVKGLLQEA
ITHASQQKLGASYCYQRLEFLGDAVLDVLITQHLYHSHTDVDPGELTDLRSAAVSNESFA
RAAVRRNLHPHLQHCSGLLLSHITEYEKLCTEALNNTSLLEEIKGPKALGDMVESIAGAI
LIDSKLDLDEVWRVFKPLLSPIVTPSSLQLDPLRKLKERCDSLGYFVKETLTKEDAIVNA
ELSLQLEDVILVGKGYERKAKAAKQRAARQLLKKFEGYLQRSRDISYVQFDSKRRKLERE
HLDDLSSKDVNIDTSSNLTDDGSSKPIMHTNENMTQMLSSAESRVDSTPANGCSNKVFGD
NIGNSGLPVIDSIDTRKGEPRKMLYELCQKLQWRRPEFTPTEDKSRTPIEFGEGSEKRKG
FSSFVSDISLQIPNFGTIVCRGEPRADKNSSFDSAVVAMLYELERRGRLTIGCS
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggagcactctcatcctgaaatgggcctcactgctcttgatcattcacctgagaaaaca
caatctcctccaaatcccaaccatttcatccccagaagctaccaagtgaaagtgtttgaa
gttgcaaagcgaaagaacacgattgcggtgttggaaaccggtgctgggaagaccatgata
gctgtgatgctaatcaaacacatttctaaagatatgatcaagtccaacggcaaaagaaag
ctgatgattttcttggctccaaccgttaatcttgtcactcagcaatccaaggttatcaaa
gattctacaactcttgaagtgggagattactatggagccaagggagtggatgaatggagt
aggagctgttgggaaatggaagttcaaacacatgatatactggtgatgacaccgcaaatt
ctcttggatgccttgaggaatgcattcttgagcttagaaatgttttgcttactgatcttt
gatgaatcccatcgtgctactggcaatcatccctatacaaaaataatgaaggaattttat
catacatccggcaacaggccaaagatttttggaatgacagcatcccctgttataagaaaa
ggtgtctcatccaccatggactgtgagaatcaaatatcagcactggaaagcatcttggat
tctcaggtttatgctatagaagacagggcagaaattgaagcatatattccctcaacagtc
caaacttgtagattttatgagaaaacatggttactcatgaatttgggtctgaaaggcgag
atggaagctttgtggtctaagtatgcttctatgttagagttgcaaagggaagtgccaagt
cagtaccagtactaccaggacattgatgataaaataaagatgctgagaaagcggatgtcc
aatgactacatgaagattttatattgccttaatgaccttgggctcatatgcgcatatgag
gctgttaaagtctgtctagagaatgccttcgatgtcgaagaagagtcccaattttataga
ggaagttctttgaagttgaaatattttctcgatgaagtcttacatataattgaaggattt
cttcaacctagcaataacatttgtacagattttgagtttgactatataaaggcacacgat
ttgggctacatatctcccaagctgcatgaacttttacaaattttccaatcatttggaagt
ggtagccaagttccatgcctcatctttgtagagagaattattacagccaatgtaattgaa
agatatgttaagaaagtaccatgcttatctcatttcacggtttcatatttgaccggaagt
aacaaatcagttggtgcagttgcaccaaagttgcaaaaggaaactttggaatcatttcgc
tctgggaaggtcaacctattatttgccactgatgtagttgaggagggaattcatgtccca
agctgttcctgtgtaatccgtttcgacctgcccaagacagtccgtagttatgtccagtcc
cgaggacgatgtcgaacaagcgattctcagttcatcttaatgcttgaaaggggcaacaag
aaacaaatagatcaagtatttgacatcatcaggagcgagtattcaatgacagagacgtca
agaaacagagaccctgaagtatgcattttaagaaattgtaattttgaggaaacaaaagta
tattatgtaaatgctactggagcatcagttacagccgattctagtgtcagtctcatacat
cgatactgcgaaaagctccctggcgataagtactttattccaaagccaactttcgacttc
gaaatgtctgaagggttgtaccagtgcaaaataacattacctcctaatgcagtttttcaa
acaactgttggtcctctgagcagcaacactcatttatcaaagcagctcgtatgcttggaa
gcttgtaaaatgctccatgaaatgggagccttggatgatcatcttctcccacttatcaaa
gagcctctagaaaatgatctcattacaaaaagcaaagaatcatctgcaggtgcaggaaca
accaaaaggaaagaactgcatggaacgacttgcattcgtgcgttatgtggaacttgggga
gaaaaacttgatggtgaaatttttgaggcctataaatttgactacttctgtaatattaat
gagacatactcgggatttgttctactgattgagtcaaagcttgataatgatgtgcaaaat
attgaagtggatcttcaattgatttcaaggatggttaaatcttctgtttcttcttgtgga
aaaatgcacctgagtgcaaaagaggtaatgcaagctaagtgctttcaagaatttttcttt
aatggcttgtttgggagattgtttttgggatccgaatcagaggggacaaagagagagttt
ttacttcagacagaaacaaaatcactatggagctcatcatatatgtatttgcttttacca
attgagacattggacacttctaataccaatccttggagagtgaattggataggaatcagt
tcttgtgctaatgtggtagagtttttgaagaaaaactattccgtgggtcctgagcatttt
aacggtgatcaaggaaacttatcactttctatgactggttcatccatgacagagtgcatg
gcttcagatctaatccactttgctaatacttcaattgattttcataatctccaaaatttg
ttagtattggctactcacacgggaagaatctattcaatcgttgaagtcattagtagcgaa
tctgctgaaagtccctttgaggaaactgttgatgctgcctcattagaatacagctatgct
gagtacttcaaaacaaagtatgggattgtccttgtgtatcctggacagccgctgttacgt
ttaaagcaaagtcataatccccataacctgcttggtgctgaaggtgctgcatcaaaagat
ggtcattctgctgagataaagccacaagctcatgttcacatgccacctgaggtcttagtt
agtattgattttcgagtagatgttctcagatcattttacttgctaccatcattaatgtac
cgtttggagtcactaatgttagctagccagcttagagaggagatcaatggcaaatcggga
aacattaaaatatcaagttcattgattctacaagcactcacaacacttaggtgttgtgaa
aatttctcattggaacggctggagtttcttggagattcagttctcaagtatgttgtgagc
tcccacctttttcttaaatatcccgagaaacatgaagggcaattaactgctcgacgcaca
agggctatttgtaatgcaaacctgcataaactaggaacagaacgcaacatacagggatac
atacgagacggtgcatttgaaccacgccgttgggctgctccagggcagcattctagattt
cctgatccatgtaagtgtggagtgaatactttagaagtacctttggacagcagatttcaa
actaaagctcctgttaaggttggaaagttctgtgatagaggtcacagatggatgaactca
aaaaccatagctgattgtgttgaggccctcattggcgcctactatgtgggtgaaggattg
tttgctgcacttcatgtgatgaagtggcttggtattgattctgaattggaattctcatta
accattgaagccattacgagggcatccctgcgatcctacattccgaaaaatgatcaaatt
gctgccttggagtcgaagcttggctacaaattttctgtcaagggtctgttacaggaggcc
ataacacatgcctctcagcaaaaactaggtgccagctactgttaccagaggcttgaattt
cttggcgatgcggtgttggatgttctaatcacacagcatctctatcatagccacacagat
gtcgatccaggagagctgactgacttgcgttcagctgctgttagcaatgaaagctttgct
cgagctgctgtaagaagaaaccttcacccacatcttcaacattgctctgggttacttctg
agtcatatcacagagtatgagaagttgtgtacagaagctcttaacaacaccagcttactg
gaagagataaaaggtccaaaggctcttggtgacatggtggagagtatagcaggggctata
ctaattgatagcaagcttgatcttgatgaagtttggagggtttttaaaccactattatct
ccgatcgtgaccccttcaagtcttcaattagacccgctacgtaaattgaaggaacgatgt
gattctcttgggtacttcgtgaaagaaacacttactaaagaggatgcaattgtcaatgca
gagctgagtttgcagctggaagatgttattttggttggaaaaggatacgaacggaaagca
aaagctgcaaaacagagagcagctcgtcaattgttgaagaagtttgagggttacttgcag
aggagcagagacatatcttatgtccagtttgattctaaaaggagaaaacttgaacgtgag
catttggatgatttatcatccaaagacgtgaatattgataccagcagcaacttaactgat
gatggttcttcaaagccaatcatgcatacaaacgaaaacatgactcaaatgttatcatct
gcagagtcaagagtagactctacaccagccaatggctgttccaacaaagtcttcggtgac
aacattggaaactcaggcttacctgttattgattcgatcgatacaagaaaaggtgaacct
cggaaaatgctctacgaactatgccagaaattgcagtggcgaaggcctgaatttacacca
acagaggataaatcaagaaccccaatagaatttggtgagggctctgaaaagagaaaaggt
ttcagcagttttgtttcagacatcagcttgcagatacccaactttggcactattgtatgc
agaggagagcctagagctgataagaatagttcatttgactccgcagtagttgccatgctt
tacgagcttgaacgacggggaagacttaccattggatgctcttaa
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integrated database retrieval system
