Prunus persica (peach): 18768344
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Entry
18768344 CDS
T03092
Name
(RefSeq) polyadenylate-binding protein 8
KO
K13126
polyadenylate-binding protein
Organism
pper
Prunus persica (peach)
Pathway
pper03015
mRNA surveillance pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18768344
09123 Folding, sorting and degradation
03018 RNA degradation
18768344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18768344
03041 Spliceosome [BR:
pper03041
]
18768344
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
18768344
mRNA cycle factors
Stress granule specific factors
18768344
Spliceosome [BR:
pper03041
]
Complex C
Other components
Complex C specific factors
18768344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_occluded
RRM_3
RRM_Nup35
RRM_7
RRM_10
PABC_AtC3H46
BRAP2
Motif
Other DBs
NCBI-GeneID:
18768344
NCBI-ProteinID:
XP_007201197
UniProt:
M5VND4
LinkDB
All DBs
Position
G8:complement(15274644..15279959)
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AA seq
653 aa
AA seq
DB search
MAQVQVQAQNANAAAAAAAAANGGAANQFVTTSLYVGDLDQNVTDSQLYDLFNQLGQVVS
VRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFSPVNGRPIRIMYSHRDPSIRKSGAG
NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDPSGQSKGYGFVQFDNDEAAQKAIEKL
NGMLLNDKQVYVGPFLRKQERDGVSDKSRFNNVFVKNLSESTTEEDLDKIFAKFGKITSV
VVMRDADGKSKCFGFVNFENTDDAARAVEDLNGKKFDDKEWYVGKAQKKSERENELKQRF
EQSMKEAADKYQGANLYVKNLDDTIGDEKLKELFAPFGTITSCKVMRDPSGISRGSGFVA
FSTPEEANRALLEMNGKMIVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVAPRMP
MYPPGGPGLGQQIFYGQGPPAIIPSQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQG
QRPGGRRGGSVQQNQQPVPIMQQQMLPRGRVYRYPSGRGLPDVPMPGVAGGMFSVPYDMG
GMPMRDAALSQPIPIGALATALANATPEQQRTMLGENLYPLVEQLEPENAAKVTGMLLEM
DQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQQAGNAADQLASLSLNENLVS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagttcaggtccaggctcagaatgcgaacgcagcggcggcggctgcggctgcg
gcgaacggtggtgcggccaaccagttcgtgacgacgtcgctttatgttggggatcttgac
cagaacgttacagattcgcagctctacgacctgtttaaccagctgggtcaggtggtttcg
gttagggtttgcagggacttgtccacccggaggtcgcttggctatggctatgtcaattat
agcaacccacaagatgctgctagggcattggatgttttgaacttcagtcctgtgaatgga
aggcccattaggattatgtattctcatcgtgatcctagtatccgcaaaagcggggctgga
aacatatttattaagaatttggacaaagctattgatcacaaagccttgcatgataccttt
tctgcatttggaaacatcctttcttgcaaggtggctacagacccctctggccagtcaaaa
ggctatggctttgtacaattcgacaatgatgaagctgcccaaaaagctatagagaagtta
aatggtatgcttttaaatgataagcaagtttatgtagggcctttcctccgcaagcaggaa
agggacggtgtttctgacaagtcaagattcaacaatgtttttgtgaagaatctatcagaa
tcaactactgaggaagacttggacaaaatttttgctaaatttggaaaaatcactagcgta
gtggtgatgcgggatgcagatggaaaatcgaagtgctttgggtttgtcaattttgaaaac
actgatgatgctgctagagctgttgaggatctaaatggaaagaaatttgatgacaaggag
tggtatgttgggaaggcccagaagaaatctgaaagggaaaatgaattgaaacaacgattt
gaacagagcatgaaagaggcagcagacaagtatcaaggggcaaacttgtatgttaaaaat
ttagatgataccataggtgatgagaaacttaaggaactgttcgctccatttggtactatt
acctcatgcaaggtcatgcgagaccctagtggaataagtaggggatcaggttttgttgca
ttctcaactcctgaagaggcaaatagagctctcttggaaatgaacggcaaaatgattgta
agtaaacctctctatgttgcacttgcacaacgaaaagaagatagaagagcaaggttgcag
gcccagttttctcaaatgcggccagttgcaatggcaccttcagttgctcctcgtatgcca
atgtaccctcctggtggtccaggtcttggacaacaaatattctatggtcaaggtccacct
gctatcattccttcccagcctggatttgggtatcagcagcagcttgttcctggtatgagg
cctggtggggctcccatgccaaatttcttcgtgccaatggttcagcaggggcagcaaggg
cagcgccctggtggcagacgtggaggctctgttcagcaaaaccagcaaccagttccgata
atgcaacagcagatgcttccaagggggcgtgtctaccgttacccatctggtcgcggttta
cctgatgttcccatgcctggtgttgctggaggcatgttttctgttccatatgacatgggt
ggcatgccaatgcgtgatgcagcactgtctcaaccaattccaataggggctttggctact
gctcttgcaaatgctacaccggagcagcaaagaacgatgctgggtgagaatctttaccca
ctcgtggaacagctggaacctgagaatgcagccaaggttacaggcatgcttctggagatg
gatcagacagaggttctgcatttgctggagtcacctgaagctctgaaagcaaaggtagct
gaggctatggaagttctgaggaatgttgctcagcagcagcaagctggcaatgcagctgat
caacttgcctcattgtcactcaatgaaaacctggtgtcttga
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