Prunus persica (peach): 18768353
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Entry
18768353 CDS
T03092
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18768353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18768353
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
18768353
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
18768353
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GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
RRP40_S1
S1
Motif
Other DBs
NCBI-GeneID:
18768353
NCBI-ProteinID:
XP_007200401
UniProt:
M5W486
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All DBs
Position
G8:21415156..21417574
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AA seq
326 aa
AA seq
DB search
MRELQLSLNQTQKVRLQRALEKLESLSSKANSNASVTVADSIPVNYEDGLLKGHGTSEFN
GEVVATVCGIVERVNKLVYVRALRARYKPEVGDIIVGRVIEVAPKRWRVEINYSHDAVLM
LSSMNLPDGIQRRRTALDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLGRGQ
LLTVPPYLVKRRKQHFHHLENYGIDLIIGCNGFIWVGEHVQVTDDMVVDQVNKSEQDDAK
PDENSISPEDQGKNYTRQETRENICRAANAIRVLSTLGFNITVEVITETVDLSTSINVAI
HEMLGSEFYVLVAEKESVRRSMTKKK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagagagctacagctttcgttgaaccaaacccagaaggttcggctacagagagctctc
gaaaagcttgagtctttgtcttcaaaggccaattccaatgcttctgttactgtcgccgat
tcaatccctgttaactacgaagacggccttctcaagggacatgggacctctgagttcaat
ggtgaagttgttgccaccgtttgcggtatcgtcgagcgcgtcaataagctggtctatgtg
cgtgctctaagggccaggtacaagccagaggttggagatatcatagtggggcgtgttatt
gaggttgctccaaagcgttggagagtggagataaactatagccatgatgcagtgttgatg
ctttcttcaatgaacttacctgacggcatccagaggcgacgaactgctctggatgaactc
aacatgcgcagcatttttgaggagaatgatgtcatttgtgctgaagttcgtggttttcaa
catgatggtttacatctccaagcaagaagtcagaagtatggaaagcttggaaggggtcaa
ttgctgacagtccctccttatctggtgaaaagacgcaagcagcacttccatcatttagaa
aactatggtattgacctgataattggctgtaatggattcatctgggttggggaacatgtt
caagtgacagacgatatggtagtggatcaagtgaacaagtctgaacaagatgatgccaaa
cctgatgaaaattccattagtcccgaagatcaagggaaaaactacactcggcaagagaca
agagagaacatatgcagggctgcaaatgctatccgcgtattgtctactttaggcttcaat
attactgtagaagtaatcacggagacggttgatttgagcacttctataaatgttgctata
catgaaatgctgggttcagagttctatgttttggttgcagagaaggagtctgtaaggcga
agcatgacaaaaaaaaagtga
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