Prunus persica (peach): 18768508
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Entry
18768508 CDS
T03092
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
pper
Prunus persica (peach)
Pathway
pper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
18768508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18768508
03400 DNA repair and recombination proteins [BR:
pper03400
]
18768508
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
18768508
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
18768508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
18768508
NCBI-ProteinID:
XP_020425467
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All DBs
Position
G8:20076174..20082329
Genome browser
AA seq
1218 aa
AA seq
DB search
MEEDEDRILLDSLGVTSANPEDIERDILSGAQNNGNASEVGGSTEEEPLERSESIDPLAA
SQAKLYNKLRAVEFEIDAVASTVEPEQAGNEGAACDGDDDGVEPGDKEDLDQASATGLNL
QHALATDRLRSLKETKAKLEKELSDLDKQRPSKGKQRDKVLSDIVKEKPAPKRKLKQVKK
SGKNLEKRLKTVSFDEDDDFDAVLDAASAGFVETERDELVRKGILTPFHKLNGFERRLQE
LGPSQRRNIPAEQHRSNDFASASVARAVQSISEAAQARPSTKLLDPEALPKLNPPTYPFK
RLKKPLKIPQSLENDTHKNKSSRLRRKRPLPDKRWRKLSNLEEKHVHENEDTASCEEENQ
EDVGDVDDNEYTYVTLEGGLKIPEHIFNQLFDYQKVGVQWLWELHCQKAGGIIGDEMGLG
KTIQVLSFLGALHFSGMYKPSIVVCPVTLLRQWKREAQKWYPSFHVELLHDSAQDPVGRK
KRSKSNESDSDSEGSLDSDYEKPALSKSTKKWDSLINRVLRSESGLLITTYEQLRIVGES
LLDIDWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFP
GKLGVLPIFEAEFSVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQL
PKKTEHVIFCSLTAEQRSAYRAFLASSDVEQIMDGNRNSLYGIDVMRKICNHPDLLEREH
SGQNPDYGNLKRSGKLKVVSQVLKVWKDQGHRVLLFTQTQQMLDIIESFLVSGGYGYRRM
DGLTPIRQRMALIDEFNNSSDVFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQAR
ERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLF
TLNDEGESGATETANLFGQLSEAANVVGTQNDKHNKQESQKVSVPLANGAGADKGKNSEV
GPSRRNGKEKADQSNDEVDEETNILRCLFDAQGIHSAMNHDMIMNAHDEEKMKLDEQASR
VAQRAAEALRQSRMLRSRDSVSVPTWTGKSGMAGAPSSVRGKFGSTVNSQLINNTKRSDE
VSNNGTNGVAGASAGKALSSAELLARIRGKEEKAVEAGIEHQFGLASGSNRAKSLDVGPS
RSSHNLGGVQPEVLIRQICTFIQQSGGSTSSSSIVQHFKDRIPSNDLPLFKNLLKEIAKL
EKTPNGSVWVLKPEFHQQ
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgaagacaggattttgttggacagtttgggcgtaacgtcggcaaaccct
gaagatatcgagagagacattttatcaggggcgcagaacaatggcaatgccagtgaagtt
ggagggagtactgaggaggagcctcttgagagatcagaaagtattgatccattggcggcc
agccaggccaaactctataacaaattgagggcagttgagtttgaaattgatgccgttgcc
tccactgttgaacctgaacaagcggggaatgaaggcgctgcttgtgatggtgatgatgat
ggcgtggaacccggggataaggaggaccttgatcaggcttctgctactgggttgaacctt
cagcatgccttagctactgatcgactgagaagtctaaaggaaacaaaggctaaacttgag
aaagagctttcagatttggacaagcaaagaccttccaagggtaaacagcgtgacaaagtc
ttatcagatattgtcaaggaaaagcctgcacccaagaggaagttgaaacaagttaagaaa
tctggaaaaaatctagaaaagaggcttaaaacagtctcatttgacgaggatgatgacttc
gatgctgtgttggatgcagcatctgcaggctttgttgaaacagaaagggatgaattagtt
cgaaaaggaattttaactcccttccataagctcaatggctttgaacgccgccttcaagaa
ctagggccatctcagaggcgtaacattcctgcagaacaacacaggagtaatgattttgct
tcagccagtgttgctagagcagtgcagtcaatttcagaggctgctcaagctcgcccatcc
accaagctacttgatccagaagctctaccaaagcttaatccacccacttatccttttaag
aggctaaaaaaacctcttaagattcctcaatccctagaaaatgatacgcacaagaataaa
agttcaagattaagaaggaagcgccctttgcctgataaaagatggagaaagctcagtaat
ctcgaggaaaagcatgtgcatgaaaatgaagacactgccagttgcgaagaagaaaaccaa
gaggatgttggagatgtagatgataatgagtatacttatgttaccttggaaggggggctg
aaaatcccagagcacatttttaaccaactttttgactatcaaaaggtaggtgtccagtgg
ctatgggaactgcattgccaaaaagcaggcggaattattggagatgagatgggtcttggt
aaaaccatccaggtcttgtccttccttggtgcattgcatttcagtggcatgtataaacca
agcatagttgtctgcccagttacacttttgcgccaatggaaaagggaggctcaaaaatgg
tacccaagctttcatgtggagttgctccacgattctgctcaggatcctgtcggtaggaaa
aaacgatccaaatctaatgaaagtgattctgatagtgaaggttcactggacagtgattat
gagaaaccggcattatccaaaagcactaagaaatgggattccttgattaaccgtgttttg
aggtcagaatctgggttgctaattacaacttatgagcaactccgtattgtaggggaaagt
ttgcttgacattgattggggttatgcagttttggatgaaggacaccgaattcggaaccca
aatgcagaaattactctagtttgtaaacagttacaaacagtacatcgtataataatgacg
ggtgcaccaattcagaacaagctgactgaactgtggtccttgtttgattttgttttccct
ggaaagttgggggtcctgcccatatttgaggctgagttttcagttcccatatctgttggt
ggttatgcgaatgcctcgccattacaagtatccacagcatacaggtgtgctgtggttttg
cgagatttgatcatgccgtatctcctccggcgcatgaaggcagatgtgaatgcccagctt
cctaagaagactgaacatgtcatattttgcagcctcactgctgagcaacgttctgcatat
agagcatttctggctagttctgatgtggaacagattatggatggtaataggaattcgctt
tatggaattgatgtcatgcgtaagatttgcaaccaccctgatctgcttgagagggaacac
tctggccagaatccagattatggtaatctcaaacgcagtggaaaattgaaagttgtttcg
caagtccttaaagtttggaaggatcaaggtcatcgtgttcttctttttacgcaaactcaa
caaatgcttgacattattgaaagttttctggtttctggtggttatggctaccggaggatg
gatggtcttactcccatcagacagagaatggccttaatagatgaatttaacaactcaagt
gatgtgtttgttttcattctgacaactaaggttggtggtttagggacaaatctgacagga
gcaaatagggtgatcatctttgatcctgactggaacccttccactgacatgcaggcaaga
gagcgtgcttggcgtattggtcagaagcgggatgtaactgtatatagattgatcacccgt
ggaaccatagaggagaaggtgtatcatagacagatttacaagcattttctcaccaataag
atattaaaaaacccacagcagaaaaggttctttaaagctcgagatatgaaggatctcttc
actctgaatgatgagggtgagagtggggcgactgaaacagctaatctgttcggtcagtta
tctgaagctgccaatgttgttggtacacagaatgacaagcacaataagcaagaatctcag
aaagtctctgtaccgcttgccaatggtgctggggctgacaaggggaagaactcagaggtt
ggaccgtccaggaggaatgggaaagaaaaagctgaccagagcaatgatgaagtagatgaa
gaaacaaatattctgaggtgcctatttgacgcccaagggatacatagtgctatgaatcat
gatatgatcatgaatgcgcatgatgaagagaagatgaagcttgatgaacaagcttcccga
gttgcacaaagagcagcagaagcactgcgccagtcacggatgcttcgaagccgtgatagt
gtgtctgtccccacatggactgggaaatcaggaatggctggcgcaccatcatctgtccgt
gggaaatttggttcaactgtgaattcccagttgatcaataataccaaacgctcagatgaa
gtttccaacaatggaacaaatggtgttgcaggggcatctgctgggaaggcattatcttct
gctgaattactggcaagaattcgaggaaaggaggaaaaagctgttgaagctggaattgag
catcagtttgggttggcttctggttctaacagagcaaaatctttggatgttggaccttct
aggtcgtctcacaatttaggtggagtgcaacctgaagtactgattcgtcagatctgtaca
tttatccaacaaagtggaggaagtacaagttcttcaagcatagtgcagcattttaaggat
agaataccctcaaatgatcttcccttgtttaagaatcttctgaaggaaatagccaaacta
gagaaaaccccaaacggatcagtttgggttctaaagccagagtttcaccagcagtga
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integrated database retrieval system
