Prunus persica (peach): 18768539
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Entry
18768539 CDS
T03092
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pper
Prunus persica (peach)
Pathway
pper03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18768539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18768539
03036 Chromosome and associated proteins [BR:
pper03036
]
18768539
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
18768539
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
18768539
PBAF complex
18768539
GBAF(ncBAF) complex
18768539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
18768539
NCBI-ProteinID:
XP_007199697
UniProt:
M5VJC1
LinkDB
All DBs
Position
G8:complement(13014914..13020525)
Genome browser
AA seq
1009 aa
AA seq
DB search
MEEKRRDAAGAQPPSNAESPAAEPSSARRRGGAQKRKASSLGGSTSSSTPSKRFTREKAM
LSHPPIHNGPLTRARQGPSSLGSASASGAAVKPTVAKRPDPVGEAVAELVKRESELEALE
ASMEAEFEAIRSRNANAHVVPSHCGWFSWTKVHPIEEQMLPSFFNGKSETRTPDAYLEIR
NCIMKIFHANPGVFIELKDLLELEVGDFDARQEVMEFLDHWGLINFDPSPPTGSAVASAE
GDGLAEKDSLVDKLYHFEALQSRSSVVPKTNITTPTVPSGLFPESAIAEELVRPEGPAVE
YHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGKFDSGMSSSDFILMEPAEAPGVSGGKW
TDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDYEDDIDASAKE
TADPTSTDNESLAPKDAPETTENKTGASESDPQTSPVETSKEVTEVNVGQDTSKPEDVNE
VKVGEETSKLEDTGELKVDQETDESFALNALKEAFEVVGYPPTSEGQLSFAEVGNPAMAL
AAFLARLVGPDVAIASAHNSLKSISASSPGTELAARHCFLLEDPPSDNKEQAGPDSVVAE
VLKDKVQEDIVDEDKSQKEDNATSGLEDKDLSNDKGDNILEKPSPEEKSQSAEEQDGIVS
HEEVEADNLNKSDNLELPKDQSPTTVGKLDDSKLEAENPPSSEKESGEGISVGKPSEPTD
TPKDVDMCDSLPSTKDKPQQPVTSNSVEEPPRSTEASKDLDVSNSLASQMNEPQQPVTAK
SEEPPRPTEESKDVDMVSDPQPQEQDDSQQPVASNSMVETGASEDQTNDGKSEKHDTIET
KVDQKIDKLKHAAVSTISAAAVKAKLLAEQEEDQIRQLAAMLIEKQLHKLEAKLGFFSEM
ENVVMRVREQLDRSRQKLYHERAQIIAARLGLPGSSSRPMPSSMPANRMAMNVANSVPRP
PLNMTSLRPPMSRPMGPTAPTSNQFSPTALAGSSIRPPSQDKLSSVGSK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagcgccgtgacgccgccggagctcagccgccgtcaaatgccgaatctccg
gccgccgagccatcttctgctcgacgccgcggcggagcccagaagagaaaggccagcagc
ctcggcggctccacctcttcatccacgccgtccaaacgcttcactcgcgagaaggctatg
ctctctcaccctccgatccacaatggcccgttgacccgggcccgccaaggcccaagcagc
ctcggttcggcttctgcgtctggggctgccgtgaagccgacggtagccaagcggcccgac
ccggtgggagaggcggtggcagagctggtgaagagggagagcgagttggaggctctggag
gcttctatggaggctgagtttgaagccattagatctcgcaatgcgaatgctcatgttgtt
ccaagtcattgtggttggttttcatggacaaaggttcaccccattgaggagcaaatgttg
ccatctttctttaatgggaagtctgagacgagaactcctgatgcatacttggagatacgt
aattgtattatgaagatattccatgcgaatccaggcgtatttattgaattgaaggatttg
ttggagcttgaagttggcgactttgatgctagacaagaagtaatggaatttttggaccat
tggggtttaattaatttcgacccgtccccaccaacaggttctgctgtggccagtgccgag
ggtgatgggttggcagaaaaggattctttggttgataagttgtatcactttgaagcatta
caatcacgctcatcagttgttccaaagactaatataacaaccccaactgtgccatctggg
ttgtttcctgagtctgcaattgctgaagagttggtgaggcctgagggaccagctgttgag
taccattgtaactcttgttcagctgattgctcacgcaagcgctaccattgccagaagcag
gcagattttgatctatgtactgattgttttagtaatgggaaattcgactctggtatgtct
tcatcagatttcattcttatggagcctgctgaagctcctggggtaagtggtgggaagtgg
acggatcaggagactctccttctccttgaagcactagaactttataaagaaaactggaat
gagattgctgaacatgttgcaacaaaaacaaaagctcaatgtatattgcactttgttcaa
atgccaattgaggacacctttcttgattatgaggatgatattgatgctagtgcaaaagaa
actgcagatcctacttcaactgacaatgaatcattggcccccaaggatgcccccgaaaca
acagagaataagactggtgctagtgagagtgacccccaaacttccccagtggaaacttca
aaagaagtgactgaagtaaatgttggacaagatacttcaaagccagaggatgtaaatgaa
gtcaaagtgggtgaggaaacttcaaaattggaagatactggggaattgaaagttgatcag
gagacagatgagagctttgcactgaatgcacttaaagaagcgtttgaagttgttggttat
cctccaacatctgaaggtcaactttcatttgcagaagtgggaaaccctgccatggcattg
gcagcattccttgcacgtttggtgggacctgatgttgctattgcatcagcgcataattct
ttgaaatccatatctgccagttctcctggcactgagctggctgcaaggcattgctttcta
ttggaagatccaccaagtgacaacaaggaacaagctggtcctgatagtgttgttgctgaa
gtgctgaaagacaaagtccaggaagacatagttgatgaagacaaaagccagaaagaggat
aacgccacctcaggtttggaagataaagatttatcaaatgataaaggtgacaacatactt
gaaaaaccttctcccgaagaaaagtcacaatctgcagaagaacaggatggcatagtttct
catgaagaagtagaagctgataatttgaacaaatcagacaatttagagttaccaaaggac
caatcaccaactactgtggggaagttggatgattcaaaactcgaggcagagaatccacca
agttctgagaaggagtcaggagagggaatttcagtaggaaagccttctgaacctacagac
acacctaaggatgtggatatgtgtgattcacttccctcaacaaaggataagcctcagcag
ccagttacatcaaattcagttgaggaacctccccgttctacagaggcatcaaaagatctg
gatgtgtccaattctctggcttcacaaatgaatgagcctcagcaaccggttactgccaaa
tcagaagaacctcctcgacctacagaggaatcaaaggatgtagacatggtgtctgaccct
cagccccaagaacaggatgattctcagcaaccagttgcatcaaattcaatggttgaaact
ggagcaagtgaggatcaaactaacgatggtaaaagtgaaaaacatgacactatagagaca
aaagtggatcagaaaattgataaactaaagcacgctgcagtttctacaatctcagcagct
gcagtgaaggcaaaacttctagcagaacaggaagaagatcaaatccgccaacttgcagca
atgttgatagagaagcagttgcataagttggaagcgaaattaggtttctttagcgagatg
gaaaatgttgtaatgagggtgagggagcaattggacaggtcaagacagaagctctaccat
gagcgggcacagataattgcagcccgccttggcttaccaggttcctcatctagaccaatg
ccatcgtcaatgcctgccaatagaatggccatgaatgttgcaaactcagttccaagaccc
ccactaaacatgacttccctaaggccacctatgtcaagacccatggggccaacggctcca
acctcaaaccaattttcacccacagccttggcaggaagttcaataaggcctcccagccag
gacaaactttcttcagtcgggtcgaagtaa
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