Prunus persica (peach): 18768617
Help
Entry
18768617 CDS
T03092
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
pper
Prunus persica (peach)
Pathway
pper03430
Mismatch repair
pper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
18768617
03460 Fanconi anemia pathway
18768617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18768617
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
18768617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18768617
NCBI-ProteinID:
XP_020425556
LinkDB
All DBs
Position
G8:21977897..21983638
Genome browser
AA seq
987 aa
AA seq
DB search
MEATTPSDSPTIKPINKGVVHRICAGQVILDLSAAVKELVENSLDAGATSIEIALKDYGK
EWFQVIDNGCGISPNNFKVLALRHHTSKLGGFPDLQSLTTFGFRGEALSSLCALGNLSVE
TRTKNELVATHLTFDHSGLLVAEKKTARQVGTTVTVKSLFSNLPVRCKEFGRNIRKEYGK
LVSLLNAYALIAKGVRIVCTNATGKNAKSVVLKHKESGSLKDNVVTLFGMSTFNCLEPVS
ISVSEPLQGXWFSSKSGQGSGRNMGDRQFFFVNGRPVDMPKVTKLVNELYRGANTQQHPI
AIMNFTVPTRACDVNVTPDKRKVFFSDESSILIALREGLQQIYSPNNARFSVNKVEEPAK
EPGRSELCSPRQKSHKFLKQSSTDDSVPEEAGIPTPEGLQQRYSPSNAHYSVNEVEEETT
MEAGRSEFCFRHQMSRMLPRQVSSDDSVPEEVHVEDQIAEGNAPLKALETDSECTHDAEG
SSHGNSMGKDFALKVHSIKKVDGSAQLIRHINRMATDRTHSLSTIVENGIAANGNSCSRS
NCVQSSLNQFVTVNKRKHENISTMLSEMPVLRNQALQTQSKNSTFDLLVAVSKSPVKHHQ
ADDSAEVDNCAEVDGNVPSKYLRADKILNKIRCPVSSGGNSKDEELEEDLQAQQKADPLS
NMASTASPSRDLKSLSEDLPVAAPSPSSSILSDTPKPKPSSGLMMHSTLQFSFQELKTRR
QQRLSRLQSSMPGGVKAQRCYAAATLELSQPENEERKARALAAATTELERLFRKQDFGRM
KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLRLDLSPQEE
VVASMHIDIIRKNGFSLEEDPHAPPGQHFKLKAVPFSKNITFGVEDVKDLISTLADSHGE
CSIIGSYKMDTVDSVCPSRVRAMLASRACRSSVMIGDALGRNEMQRILEHLAGLKSPWNC
PHGRPTMRHLVDLKTIRRSEEDDDADS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaacaactccatccgattctccaaccataaaacccataaacaagggcgtggtg
cacagaatctgcgccggccaagtgattctagacctctcggccgccgtgaaagaattggtc
gagaacagcctcgacgctggcgccaccagcatcgaaatcgcgctcaaagactacggcaaa
gagtggttccaagtcatcgacaatggctgtggcatttcgccgaacaacttcaaggtcctt
gccctcaggcatcacacttccaaactgggcggtttccctgacctccagtctctgaccacg
ttcgggttccgaggcgaggccttgagttctctgtgtgcgttggggaatttgtcagtggaa
accaggacgaagaacgagctcgttgccacgcacttgacttttgaccattcgggtttattg
gtcgccgaaaagaagacggcccggcaagtcgggactaccgtcactgtgaagagcttgttt
tcgaatttaccagtgcggtgcaaggaatttggtcgcaacattcggaaggagtacggaaag
cttgtttccttactgaatgcctatgcccttattgcgaaaggagttcgtatcgtctgcacc
aatgccaccggtaaaaatgcaaagtctgtggtattaaaacacaaggaaagtggttccctt
aaggataacgttgtcacacttttcggtatgagcacgttcaattgcttagaacctgtgagt
atatctgtttctgaacccttgcaaggttgatggttttcttccaagtctggacaaggtagt
gggcgaaatatgggagatagacagttcttttttgtgaatggtagaccagtggatatgcct
aaagttaccaagcttgtgaatgagttatatagaggagcaaacacccagcagcatcccatt
gcaataatgaattttactgttccaacaagagcctgtgatgtcaatgtaactcctgataaa
aggaaagtgttcttttctgatgaaagctccatactgattgccctaagggagggtctgcag
cagatatattctccaaataatgctcgtttctctgttaataaagttgaggagcctgctaag
gaaccaggtaggtctgagctgtgttctcctcgtcaaaagtctcataagtttctgaaacaa
tcatctacagatgacagtgttcctgaagaagcgggcatccccaccccggagggtttgcag
cagagatactctccaagtaatgcacattattctgttaatgaagtcgaggaggagaccact
atggaagcaggtaggtctgagttctgtttccgtcatcaaatgtctcgtatgcttccaaga
caggtatcttcagatgacagtgttcctgaagaagttcatgttgaggatcagattgcagag
ggcaatgctcctctgaaggctcttgaaactgactctgagtgcactcatgatgcagaaggg
tcgagccacggaaattcaatgggaaaagacttcgctttaaaggtccacagcattaagaag
gtcgatggtagtgcgcaattgataagacatatcaataggatggcaactgatcgaacccat
tctctttcaaccatcgttgagaatggaattgctgcgaatggaaattcatgtagtcgttca
aactgtgttcaatcgtcgcttaaccaatttgtaactgtaaataaaagaaagcatgaaaat
attagtacaatgctatctgaaatgcctgtcctaaggaaccaagctcttcaaactcaatcc
aagaatagcacctttgatttgcttgtcgctgtttcaaaatctccagttaaacatcaccag
gctgatgattctgctgaggttgataattgtgctgaagttgatgggaatgtgccatccaag
tatctgagagcagacaagatcctcaataaaatcagatgtccagtttcttctggaggcaac
tctaaagatgaagaacttgaagaggatttacaggctcaacagaaagcagacccgctttct
aatatggcatcaactgcttcacctagcagggatcttaaaagtttgtctgaagatcttcct
gttgcagctccatcaccttcttcttctatactgtcagacactccaaagccaaagccttct
tctggtcttatgatgcattccacgttgcaatttagttttcaagagctaaagacaaggagg
cagcagagattgtctagattgcaatcaagcatgcctggaggagtaaaagcacaaaggtgc
tatgctgctgcaacattggagctttctcaaccagaaaacgaggagcgcaaagcaagggct
ttagctgcagccactactgagttggaaagactttttagaaagcaagattttggtagaatg
aaggtgattgggcagttcaatcttggcttcatcattggaaagttagatcaagatttattt
attgtggatcagcatgcagctgatgagaagtacaattttgagcgtctgtcacaatctacc
atcttaaaccaacagcctttgcttcggccattgaggttggacttatctcctcaagaagaa
gtggtagcttccatgcacatagacataatcaggaaaaatggattttctttggaagaggat
ccacatgctccacctgggcagcatttcaaattgaaagctgtccccttcagtaaaaacata
actttcggagttgaagatgttaaggacctcatttccactcttgctgatagtcatggggaa
tgctcaatcattggtagttataagatggacactgttgattctgtttgcccatctagagtt
cgcgcaatgctggcatcacgcgcttgcagatcatccgttatgattggagatgcccttgga
agaaatgagatgcagaggattctggagcacttggcaggtctgaagtctccgtggaattgc
ccgcatggcagaccaactatgcgccatttggttgacttgaaaaccataagaaggtcggaa
gaagacgatgatgcagactcttga
DBGET
integrated database retrieval system
