Prunus persica (peach): 18769079
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Entry
18769079 CDS
T03092
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18769079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18769079
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
18769079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
18769079
NCBI-ProteinID:
XP_007204663
LinkDB
All DBs
Position
G7:1421806..1432510
Genome browser
AA seq
919 aa
AA seq
DB search
MPLTTTVSEEAMKVDQPQPPRTEALQTLTKGPLSSAISKLSGSSRGIPSNQDFYFYRNFD
KFKVPIEQITEQSQLMLGSVGSSAPIWGKKMAFPQDLDDAYDWLVNVNDEVLERFDSSVD
EFKRIRKEAEEPKRPMIADFDSENGFQLVCGKKKKGPSGSASANGDSTQVSSVKVATKDK
KTVGTKPKVPFHIPTIRRPQEEFNILVNNSNQPFEHVWLQRSEDDQRFLHPLDKLSVLDF
VGTDVGDVEPVKPPSLESTPFKLVEEVKDLKELAAKLRGVNEFAVDLEHNQYRSFQGMTC
LMQISTRTEDFIVDTLKLRIHVGPYLREVFKDPAKRKVMHGADRDIMWLQRDFGIYICNL
FDTGQASRVLKMERNSLEYLLHQLCGVTANKEYQNADWRLRPLPEEMVRYAREDTHYLLH
MYDLMRTMLCLMPKESENLDTPLVEVYKRSYDICMHLYEKELLTENSYLHIYGLQGAGFN
AQQLAIVSGLCEWRDVVARAEDESTGYILPNKTLLEIAKQMPSTTSKLKRLVKSKHPYVE
RNLASVVSIIGHSMQNAAFFEPAVEHLKLGHAGMATEENILANEGSEAVLPDESGSNSIK
GDISAASPASPPHKMEDTELGCDASELVRGGQESSLEHPGENRKGKIECGSNTSVLPRQN
IVPRQSREASSNACVLDSTKVTGVSVQVQKKPSCAFSSLLGSGVPKRKFDADRKNKEDKL
EQIRSSMNFPFHSFTGSSEQSKPIIEAPATSSKIPHSEGPLTASPERSNLVDIITLENDS
DVGEPINGCSETRNENDSVASALERDGEDEPMSLSDLSSSFQKCFQSRKQNKKPREVEKS
QESGGLQVKPFDYEAAKRGVIFGAKPVKEAGEGVRSLNSGGKKKSLGGIVSNDDGSKELA
QGRRRQAFPASGNRSATFR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgccattgacaaccaccgtgagcgaagaagccatgaaggtggaccaacctcagccaccg
cggaccgaagccctccaaaccctaaccaaaggtcctctctcctcggcgatatccaagctc
tcaggctcatcgcgaggcataccttccaaccaagacttctatttctaccgcaacttcgac
aaattcaaggtcccgatcgaacaaatcacagaacagtcgcagttaatgctcggctccgtt
ggctcttcggcgcctatttggggcaaaaagatggctttcccccaagacttggacgacgcg
tacgattggctggttaacgtcaacgacgaggtgctcgaaaggtttgactcgtcggtggac
gagttcaagaggatcaggaaagaggcagaagagcccaagcggccgatgattgcggatttt
gactcggaaaatgggtttcaattggtctgtgggaagaagaagaaggggcccagtggctcg
gcgagtgctaatggtgattcgactcaggtctcgagcgtgaaggtggctaccaaggacaag
aagactgtggggacgaagcccaaggtaccgtttcatataccgacaattcggaggcctcag
gaggagttcaacattttggttaataattcaaaccagccgtttgagcatgtttggttgcag
agaagtgaggacgatcagcgttttcttcatccccttgataagctttctgttctggatttt
gttggcactgacgttggggatgttgagcctgtaaaaccaccctcattagagtctacgcca
ttcaagcttgtggaggaggtcaaagatctgaaagagctggcagctaagctgcgtggtgtt
aatgaatttgcggttgatttggaacacaatcaatatcgatcctttcaaggaatgacttgc
ttgatgcaaatttctactagaactgaagattttatagtagatactttgaagcttagaatt
catgttggtccatatcttagggaagttttcaaggaccctgccaagagaaaggtgatgcat
ggagcagatcgagatatcatgtggcttcaacgtgattttggcatttatatctgcaatttg
tttgatactggccaggcctcaagggtattgaaaatggagagaaatagtttggaatatctt
ttacatcagttatgtggtgttactgctaacaaagaataccagaatgcagattggagatta
cgccctcttcctgaggagatggtcagatatgccagagaagatacacactatctgttgcac
atgtatgatttaatgagaacaatgttatgtttgatgccaaaggaatcagaaaacttggac
actcctttagtagaggtttacaagcggagttatgatatatgcatgcatctgtatgagaaa
gagcttttgacagaaaattcctatctccatatatatgggttgcaaggtgctggtttcaat
gctcagcagcttgcaattgtttccggtctttgtgagtggcgggatgttgttgctcgtgca
gaggatgaaagtactggctatatattaccaaacaaaactcttcttgaaattgctaaacag
atgcctagcaccactagcaagttaaagcgattggtgaaatcaaagcacccgtatgttgag
cgcaatcttgcttctgtggttagcatcattgggcattctatgcaaaatgctgcttttttt
gagcctgcggtcgaacatctgaaattgggacatgcgggtatggcaactgaagagaatata
ttggcaaatgaaggatctgaagccgtcttacctgatgagtctggcagcaattcaattaaa
ggtgatatatctgcagcttcacctgcttctccgccacataaaatggaggatactgaactt
ggatgtgatgcctcggaacttgtaagaggtggacaagaaagctctcttgagcatcctggt
gaaaataggaaaggaaagattgaatgtggtagcaacacttctgtgcttcctagacagaat
attgttccgcggcaaagcagagaagcaagcagcaatgcctgtgtattagattcaacaaag
gttactggagtaagtgttcaggtgcaaaagaagcctagctgtgcctttagttccctgttg
gggagtggagttccaaaaagaaagtttgatgctgatagaaagaacaaggaagacaagttg
gagcaaattaggtcgtcaatgaactttcctttccactcatttacgggaagcagtgagcaa
tcaaagccaatcatcgaagcaccagctacaagttccaaaattccccactctgaagggcct
ctcactgcatcacctgagaggtctaatttagttgatatcataacactggaaaatgattca
gatgtgggtgaaccaataaatggttgctcagaaacgagaaatgagaatgattcagtggca
tctgctttggagagggatggagaggatgaacctatgtctctctccgatttgtcctcaagc
ttccaaaaatgttttcagtcacgtaagcaaaacaagaaacccagagaagtggagaaatcc
caagaatctggtggtttgcaggtgaagccttttgactatgaagcagcaaagagaggggtc
atttttggagctaagccagttaaagaagctggggaaggtgtaaggagcctgaattcagga
gggaagaaaaaatctttaggcggtatagtctcaaatgatgatgggtcaaaagaactagca
caaggtagacgacgacaagcttttccagcaagtggaaatagaagtgcaacgtttcgttaa
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