Prunus persica (peach): 18769484
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Entry
18769484 CDS
T03092
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18769484
03041 Spliceosome [BR:
pper03041
]
18769484
03036 Chromosome and associated proteins [BR:
pper03036
]
18769484
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18769484
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
18769484
mRNA cycle factors
Common to processing body (P body) and stress granule
18769484
Spliceosome [BR:
pper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
18769484
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18769484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18769484
NCBI-ProteinID:
XP_007204596
LinkDB
All DBs
Position
G7:20732656..20736968
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AA seq
613 aa
AA seq
DB search
MTMSWSDAVTESTQKPTRQPRPSYVPPHLRHSGSSYGYGSFTESAQYGFRSSYTGPGRQP
GRAGTARGGRGRGRGGRLWAQPPPNPSPDLNPSDNVSEKFDQLKVTEEDSNGGINFDAYE
DIPVEASGADIPPPVDTFHEIDLGECLNHNIKTRCKYVKPTPIQRHAIPVVMAGRDLMAC
AQTGSGKTAAFCLPIISGVLNNNSLGRSPTRGGAHTVCPTALILSPTRELAGQIHDEAKK
FAYQSGVKIVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERSRVSLRMIKYLALDE
ADRMLDMGFEPQIRRIVEQMDMPCPGARQTLLFSATFPNEIQRLAADFLSNYIFLAVGRV
GSSTDLIAQKIEFVEDMDKRSHLMDHLHSQQANGSHGKPALTLVFVETKRGADALENWLC
MNGFPAIAIHGDKVQMERERALRSFKCGSAPILVATDVASRGLDIPHVAHVINFDLPKGI
DDYVHRIGRTGRAGNSGLATAFFNDKNQPLAKGLIELMQESNQEVPSWLNEYAEGSQTYS
SGGGGGRSQRSGGSRFGGYDFRRSAQSGRESYYGPSSYGYGDCSVGTSAASYNDATVPYG
YGNYETIVAGGWE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtcttggtctgatgctgttactgagtcaacccaaaagcccactcgccaacct
cggcccagctacgtacctccacatctcaggcacagtggcagctcctacggatatgggtcc
tttacagagtcagcccagtacggctttcggtcaagctacaccggtcccggtaggcaaccc
ggtcgggccggcacagctcgcggcggccgaggtcgaggccgtggtggtcgcttgtgggct
caaccacccccaaacccaagcccagacctaaacccgtctgacaatgtctctgagaaattt
gaccagctcaaagtcactgaagaagatagcaatggcggtatcaattttgatgcctacgaa
gacatcccagttgaggcgagtggcgccgacattccaccgccggtggacacctttcacgag
atcgatttgggtgagtgtttgaaccacaacatcaaaacgcgatgtaagtacgttaagccc
acgcctattcagcgccacgcgattccagtagtcatggctggccgggacttaatggcttgt
gctcaaactgggtctggcaaaacggcggcgttttgcttacccatcattagtggggtcttg
aacaataacagtttgggaaggtcgccgactcgtggtggggctcatactgtgtgtcctact
gcgctcattttgtctccgactagagagttggctggtcagatacatgatgaagctaagaag
ttcgcttatcagagtggggtcaagattgttgttgcttatggtggggcaccaatttctcag
cagttccgtaatctggaaagaggtgttgatatcttagttgccactccagggcgcttagtg
gacatgattgagaggtcacgagtttcacttagaatgatcaaatatttggcattagatgag
gctgataggatgttggacatgggttttgagccacagattagaaggattgttgaacaaatg
gacatgccttgccctggtgctagacaaacgttgcttttcagtgctacattcccaaatgag
atacagaggcttgctgcagattttctttcaaactacatatttctggcggttggaagagtt
ggatcaagtactgatcttattgcacaaaaaatcgaatttgttgaggatatggacaaacga
agccacttaatggatcatcttcatagccagcaggccaatggaagccatggcaagcctgct
ttaacgttggtgtttgtggagaccaagagaggtgcagatgctttagaaaactggttatgc
atgaatggtttcccagcaattgcaattcatggtgacaaagtgcaaatggagagggaacga
gctttgagatcattcaagtgtggctctgctccaatattggtggcaacggatgttgcttca
cgaggtttagacatccctcatgttgcccatgtcatcaattttgacctcccaaaaggcata
gatgactacgttcacaggattggtcggacgggacgtgctggaaattctggtcttgcaact
gccttcttcaatgacaagaaccagccacttgcaaagggactaattgagttgatgcaggag
tcaaaccaggaggttcctagttggcttaacgaatatgctgaaggatcacagacttatagt
agtggtggcggtggtggtaggagccaaaggtctggtggcagtaggtttggtggctatgac
tttcgtaggtctgcccaatcggggcgtgagagttattacggtccaagcagctatggttat
ggagattgttctgtgggtacttctgctgcttcctataatgatgctactgttccatacggc
tatggaaattatgaaactattgttgctggtgggtgggaatag
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