Prunus persica (peach): 18769771
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Entry
18769771 CDS
T03092
Name
(RefSeq) DNA-directed RNA polymerase II subunit 1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pper
Prunus persica (peach)
Pathway
pper03020
RNA polymerase
pper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
18769771
09124 Replication and repair
03420 Nucleotide excision repair
18769771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18769771
03400 DNA repair and recombination proteins [BR:
pper03400
]
18769771
Enzymes [BR:
pper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
18769771
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
18769771
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
18769771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
TACC_C
Motif
Other DBs
NCBI-GeneID:
18769771
NCBI-ProteinID:
XP_007203058
UniProt:
M5VSC7
LinkDB
All DBs
Position
G7:17458551..17467686
Genome browser
AA seq
1844 aa
AA seq
DB search
MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK
FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI
EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR
PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL
EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ
LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP
GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV
NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA
EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY
LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP
YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYS
PSSAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPGSPFTSGVSPDY
SPSSPQYSPSAGYSPSQPGYSPSSTSQYTPQTSEKDTKDDRSTR
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggatatacgcttcccattctcgccggcggaggttgccaaagtccgctgtgttcagttc
ggcattctgagcccggacgaaataaggcaaatgtctgtagtgcagattgagcacagcgag
accatgttgggaggcaaacccaagacggcaggtttaagtgatcctcggcttggtacaatt
gacagaaaaatgaagtgcgaaacatgtactgccaacatggctgagtgcccgggccatttt
gggcaccttgagcttgccaaaccaatgtttcacattggtttcatgaagaccgtgttgtcc
ataatgcgatgtgtttgcttcaattgctcaaaaattcttgtcgatgaggatgatcacaag
tttaagcaggctttgagaattaagagcccaaaaaataggctaaaaaagattttggatgca
tgcaaaaacaaaaccaaatgtgatggtggtgatgaaattgatgtccaaggccaggaatct
gaagaacctgtaaagaaaagtcgcggcggctgtggtgctcagcagcccaagctctctata
gagggtatgaaaatgaatgcagaatacaaagcccaacggaagaaaagtgatgaccaggaa
cagcttcctgaacctgtggaaaggaaacagacacttactgcagaaagggttcttagtgtc
ttaaaaaggataagtgatgaggactcccagttattgggattgaaccctaaatacgctcgt
cctgattggatgattttacaagttctgcctattcctccacaacctgtgagaccctctgtg
atgatggacacctcatccaggagtgaggatgatttaacacatcagttagccatgattatt
cgtcacaatgagaatctgaggaggcaggaaagaaatgggtcacctgctcatataatttca
gagtttgcacaactgttgcaattccacatagccacgtattttgacaatgagttgcctgga
ctaccgagggctactcagagatcagggaggcctattaaatcaatatgtagtaggcttaag
gcaaaagaaggcagaataaggggaaatttaatggggaagcgagttgatttctcggcacga
acggtgattactcctgatccaaacataaacattgatcaattaggagtaccatggagtatt
gctttgaatctcacgtacccagagactgtgactccatataatattgaaaggttgaaggag
cttgttgagaatgggccccatcctccacctggtaaaactggtgcgaagtatataatacga
gatgatgggcaaaggcttgatcttcgttacttgaagaaaagcagtgatcatcatttggag
cttggatataaggtggagcgccatttgaatgatggagactttgtcctcttcaatcgtcaa
cctagtctccataaaatgtctattatggggcacagaatcaagatcatgccgtactcaact
tttcgcttgaatttgtctgtgacctctccttacaatgccgactttgacggggacgagatg
aacatgcatgttcctcagtcttttgaaactagggcagaagtactggagctcatgatggtg
cccaagtgcatagtgtctcctcagtcaaatcggcccgtgatgggaattgtgcaggatacc
cttttagggtgccgtaagattaccaagagggataccttcatagagaaggatgtttttatg
aatattttgatgtggtgggaggattttgatggaaaagttcctgctcctgcaattttgaag
ccacggccattgtggactggcaagcaagtcttcaatcttataataccaaaacagataaat
ctccaaaggacttctgcatggcactcggaagcagaaagtggcaacattacccccggagat
acttttgttagaatagagaagggggagctacttgctggaacactttgcaagaaggcactt
gggacatctacaggaagtctgatacatgtcatatgggaagaagttggcccggatgcagct
cgcaagttcctgggtcatacccaatggcttgttaactattggctactacaaaatgctttt
agcattggaattggagatacaattgctgatgctgcaacaatggagaaaattaatgaaaca
atttcaaaggcgaaaaatgaggtgaaagatcttataagtaaagcccaatccaagcagctg
gaggctgaacctggacgaaccatgatggactcattcgaaaacaaagtgaaccaggttttg
aatagggctcgtgatgatgctggaagtagtgctcaaaagagtttatcggagagcaacaat
cttaaagccatggttacagcagggtccaaagggagttttatcaacatatcccagatgact
gcttgtgtggggcagcagaacgttgagggtaagcgtatcccttacgggttcatagaccgg
actttgccccacttcactaaagatgattatggaccagaaagtcgtggatttgtagaaaat
tcctacctgcgtgggttaactccacaggagttcttttttcatgctatgggtgggagggaa
ggtcttatagatactgcggtcaagacatctgagactgggtacattcaaaggagactggtg
aaggctatggaggatattatggtcaaatatgatggcactgtcagaaattcgttgggggat
gttatacagtttctttacggggaagatgggatggatgctgtttggatagaatcacaaaag
ctggattctttaaagatgaaaaaatcagaatttgataagactttttcgtatgagcttgat
gatgaaaattggaatccagactacatgttgcatgaacatgttgaggatctcaaaactatt
agagagtttcgcaatgtgtttgatgcagaggttcagaaacttgaaacagacagattacaa
cttggaacagagatagcagtaacaggtgataattcttggccattgcctgttaacctgaag
aggctcatttggaatgcacaaaaaacctttaagattgacttccgaaggacttccgatatg
cacccaatggaaatcgtggaagctattgataagctccaggagaggctgaaggttgttcct
ggtgatgacttgttgagtgttgaagctcaaaagaatgctacactgtttttcagtatttta
cttcgcagcactttcgctagcaaacgggtgttggatgagtacaggcttactcgtgaagca
tttgagtgggttattggggagatagagtcacgcttcctgcaatcacttgtagcacctggc
gaaatgattggttgcgttgctgcacaatctattggtgagcccgccactcagatgacactg
aatactttccactatgctggtgtgagtgcaaagaatgttaccctaggtgttcccaggttg
agggaaattattaatgtggctaagagaatcaaaacgccatctctgtctgtctacttaaag
cctgaagctaataaaacaaaggagagggcaaaaaatgtccagtgtgctttggaatacacc
actctccgaagtgtaactcaagctacagaagtgtggtacgatccagaccccatgagcaca
ataattgaagaggatgttgattttgtcaactcttactatgaaatgccagatgaagaggtt
aaccctgataaaatttctccttggttgcttcgcattgagttgaatcgcgaaatgatggtg
gataagaagttgagcatggctgacattgctgagaagatcaatcttgaatttgatgatgat
ttaacttgtatattcaatgatgacaatgcggaaaagttgatccttcgaatccgtatcatg
aatgctgaagctccaaaaggggaattggttgatgaatccgctgaagatgatgtatttttg
aagaagattgagagtaacatgctgacagaaatggctcttcgaggtatcccagatattaac
aaagtgttcattaaacatggtaaagttaacaagtttgatccgaatgaaggatttaaagca
gagcaagagtggatgctggatacagaaggtgttaatctcttagctgtcctgtgtcatgat
gatgttgatgccaggaggacgacgagtaatcacttgattgaaattcttgaaattcttgga
attgaggcagttcgtcggtcactgttggatgagttgcgtgttgttatatctttcgatggg
tcttatgtgaattatcggcatctggctatcctttgtgataccatgacctatcgtgggcac
ttgatggccattactcgtcatggcatcaatcgaaatgacaccggtcccatgatgaggtgc
tcatttgaagaaactgtcgatattcttcttgatgctgcagtgtttgcagaaacagattat
ttgagaggtgtaactgaaaacataatgttaggccagcttgcacctattggtacaggagac
tgtgccctgtatctcaatgacgagatgttgaagaatgcaattgaactccagctacctagt
tatatggatggtcttgatttcggtatgacaccatctcgttctccagtgtcgggaactcca
tatcatgagggcatgatgtctccaaattatttgctgagcccaaaccttcgtctgtcaccc
atttcagatgcccagttttctccctatgttggaggaatggcattctctcctacttcatct
ccgggctacagcccatcatcccctggctacagtccgtcctcccctggatacagtcccacg
tcccctggttatagtcccacctcgcccgggtacagccccacttctcctgggtacagtccc
acctctccaacctatagtcctagttctccaggttatagtccaaccagtccggcctattct
cctacaagtccatcatactcacccacctcacccagctatagccccacttctccaagttac
agccccacatctccaagttacagccctacatctccaagttacagtccaacttcaccaagt
tacagtccaacatcacctgcttacagcccgacatcacctgcttacagcccgacttcacct
gcatatagtcccacatcaccttcctacagccctacatcgccttcctatagccctacatca
ccttcctacagcccaacgtcgccctcctacagccccacatctccatcctacagcccaacc
tcaccggcctacagcccaacttctcctggttacagcccaacttctcctagttatagtcca
acttctcccagctatagccctacatctccaagttacaatcctcagtcagccaaatacagt
ccatcatcggcatactctccaagcagtccaagattatcaccatctagtccatatagtcct
acgtctccaaattacagcccaacctcaccatcgtattcacctacgtctccatcttactct
ccttcaagccccacgtacagtcctggaagcccatttacctctggagtgagcccagattat
agtccaagttctccacaatacagtccaagtgctgggtactcacctagtcaacctgggtac
tcgccgtcatctactagccagtacacgcctcaaacgagcgagaaggacactaaggatgac
agaagcactcgttaa
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integrated database retrieval system
