KEGG   Prunus persica (peach): 18771175
Entry
18771175          CDS       T03092                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
  KO
K12607  CCR4-NOT transcription complex subunit 10
Organism
pper  Prunus persica (peach)
Pathway
pper03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18771175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pper03019]
    18771175
Messenger RNA biogenesis [BR:pper03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     18771175
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_14 TPR_12 ARM_TT21 TPR_11 TPR_19 ARM_TT21_N TPR_MalT TPR_10 TPR_8 SRP_TPR_like TPR_15 ANAPC3 DUF627 HAT_Syf1_CNRKL1_C
Other DBs
NCBI-GeneID: 18771175
NCBI-ProteinID: XP_007204658
UniProt: M5VWQ9
LinkDB
Position
G7:21099006..21105659
AA seq 832 aa
MASSSSSSLTVANRDGSSSASEDEAVMSVTRAYAQDALLQFQSGKFDQCLTALSECLKRK
PNDPKIFHNIGLAEFYRDGCSHPKRLLDVLNDVKKRSEELARASAEQVESGSNIGGSRGS
STMGHPFSAVYMDEFDTYVATLNIAVIWFHLHEYAKALSVVEPLFQNRGPIDEKTALNIC
LLLLDVGLACHDATKSADVLVYLEKAFGVSCMNQGDSGSTALQQPANPVAKSPSLPTNSS
AADGPNLDSDANALEAEETGEYDGAVFDMDVAQPTALLSSNDLSRNPVDISVSSVYLKLK
MQLYKVRFLLLTRNLKQAKREVKHAMNIARGRDSSMALLLKSQLEYARGNYRKAIKLLMA
SSNRTDARISSMINNNLGCIYYQLGKYHTASVFFSNALLNCSSLRKDRPLNLLTFSQDNS
LLIIYNSGMQYLACGKPLLAARCFQKAGLVFYNRPLLWLRFAECCLMALEKGLLETTLAS
SEVRVYVIGNGKWRQLVMEDGVSKNGNSGSFERGDLFLGSDQQPKLSMSLARQCLSNALY
LLNCSESSYCKNSLPSNFFLEDNELGEVASSKNSNNKNFHSIDSEASAFSVGLGQSGING
DAKEQKAGTTQELVQNSLLYYADIRNKENLLLKQALLANLAFVELELENPIKALSIARSL
LELPECSRIYIFLGHVYAAEALCLLNRAKDAADHLMTYLSGGNNVDLPFSEEDSEQLQGV
RAVDYEELNGGSMSAKSSSPEDTLGIVFLKPEEALASLYVNFAALYAMQGELDQARQFVA
RALSLVPNSPEATLTAVYVDLKLGKSQEALAKLKQCSRVTFLPSGLTLNKAS
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggcttcatcttcgtcttcgtcattaacggttgcgaatcgggacgggtcttcttcagct
tcagaggacgaagctgtcatgtccgtaacccgtgcttacgcgcaggacgccttattgcaa
ttccagtcgggcaagttcgatcagtgcctaaccgccttgtccgagtgcctgaagaggaag
ccaaacgatcccaaaatatttcataatattggacttgcggaattctatcgagatggttgc
tcacatcctaagaggttgctcgatgtacttaatgatgtgaagaaacgaagtgaagagctt
gctcgagcatctgcagaacaggtggagtctggtagcaatattggagggtccagaggaagt
agtacaatgggacatcccttttctgctgtttacatggatgaatttgacacatatgttgct
accttaaacattgcagttatctggttccatcttcacgaatatgcaaaggcattgtctgtc
gttgaacctctgtttcaaaatagaggacctatagatgagaaaactgctcttaatatttgc
cttttgttgctggatgttgggctggcctgtcatgatgcaacgaaatccgctgatgttttg
gtttatctggaaaaagcttttggtgttagctgtatgaatcaaggagacagtggaagcact
gcgttgcaacaacctgcaaacccagttgcaaagtctccatcacttcccaccaattcatca
gccgcggatggtcccaatttggattcagatgcaaatgccttggaggctgaggagacaggc
gagtatgatggtgctgtttttgacatggatgtagcacagccaactgctcttttatcttca
aatgatctttcaaggaacccagttgacatatccgtctcttctgtttatctgaagcttaag
atgcaactttacaaggttcggtttctgcttctcactaggaacttaaagcaagctaaacgt
gaagtgaagcatgctatgaatattgcacgcgggagagattcttctatggctctcctcttg
aagtcccagcttgaatatgctcgtggtaattatcgtaaagccatcaagttgttgatggca
tctagtaatcgaacagatgcaaggatatcaagcatgatcaacaataatctaggatgcatt
tattatcagcttgggaaatatcacacagcatcagtattcttctccaacgcattgcttaat
tgttcatctcttcggaaggacaggcctctaaatctgttaactttttcacaggacaattcc
ctcctaattatatataactctggtatgcagtacttggcctgcgggaaaccactacttgct
gctcgctgttttcaaaaggctggtttagttttctacaaccggcctctgttgtggcttcga
tttgctgagtgctgtctgatggctttagagaagggattattggaaaccactctggcatca
tcagaagtcagagtttatgtcattggcaatggaaagtggaggcaacttgtaatggaagac
ggggtttccaagaatggaaactcgggttcttttgaaagaggtgatttgtttttgggcagt
gatcagcagcctaagctctcgatgtcccttgcacgccagtgtctctctaatgccctgtac
ttactgaactgttctgagtcaagctattgtaagaattctttgccctctaatttcttctta
gaggataatgaattaggtgaagtggcatcttccaagaactcgaacaacaagaactttcac
agcatcgattccgaggcatctgcgttctctgtaggtttgggccagtcaggcataaatggg
gatgcaaaagagcaaaaggcaggaactactcaggagcttgtgcagaactcccttttgtac
tatgcagatattcgtaacaaggaaaatctgttgctcaaacaagctcttcttgcaaatctg
gcatttgtagagttggaattggaaaatcctattaaggccttgtcaattgcaaggtctctc
ttggaacttccagaatgttcaagaatttacatctttttaggtcatgtgtatgctgcagag
gctctctgcttgctgaacagggcaaaggatgctgctgatcatttgatgacatatttgtct
ggaggtaacaacgttgacttgccattcagcgaggaggactctgagcaattgcaaggagtc
agggctgttgattatgaagagttgaatggaggatcaatgagtgccaaaagttcttcccct
gaagacacattaggtatcgtgttcctcaagccagaagaggcactggcaagcctgtatgta
aattttgctgccttgtacgctatgcaaggtgaacttgatcaagcccgccagtttgttgca
cgggcattatccctagtacccaacagtccagaagcaactttgactgcagtttacgtggat
ctcaagctcggtaagtcgcaagaagctcttgccaagttaaaacagtgtagtcgagttaca
ttccttcctagtggattgacattgaacaaagcttcgtag

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