Prunus persica (peach): 18771175
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Entry
18771175 CDS
T03092
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18771175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18771175
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
18771175
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_12
ARM_TT21
TPR_11
TPR_19
ARM_TT21_N
TPR_MalT
TPR_10
TPR_8
SRP_TPR_like
TPR_15
ANAPC3
DUF627
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
18771175
NCBI-ProteinID:
XP_007204658
UniProt:
M5VWQ9
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Position
G7:21099006..21105659
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AA seq
832 aa
AA seq
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MASSSSSSLTVANRDGSSSASEDEAVMSVTRAYAQDALLQFQSGKFDQCLTALSECLKRK
PNDPKIFHNIGLAEFYRDGCSHPKRLLDVLNDVKKRSEELARASAEQVESGSNIGGSRGS
STMGHPFSAVYMDEFDTYVATLNIAVIWFHLHEYAKALSVVEPLFQNRGPIDEKTALNIC
LLLLDVGLACHDATKSADVLVYLEKAFGVSCMNQGDSGSTALQQPANPVAKSPSLPTNSS
AADGPNLDSDANALEAEETGEYDGAVFDMDVAQPTALLSSNDLSRNPVDISVSSVYLKLK
MQLYKVRFLLLTRNLKQAKREVKHAMNIARGRDSSMALLLKSQLEYARGNYRKAIKLLMA
SSNRTDARISSMINNNLGCIYYQLGKYHTASVFFSNALLNCSSLRKDRPLNLLTFSQDNS
LLIIYNSGMQYLACGKPLLAARCFQKAGLVFYNRPLLWLRFAECCLMALEKGLLETTLAS
SEVRVYVIGNGKWRQLVMEDGVSKNGNSGSFERGDLFLGSDQQPKLSMSLARQCLSNALY
LLNCSESSYCKNSLPSNFFLEDNELGEVASSKNSNNKNFHSIDSEASAFSVGLGQSGING
DAKEQKAGTTQELVQNSLLYYADIRNKENLLLKQALLANLAFVELELENPIKALSIARSL
LELPECSRIYIFLGHVYAAEALCLLNRAKDAADHLMTYLSGGNNVDLPFSEEDSEQLQGV
RAVDYEELNGGSMSAKSSSPEDTLGIVFLKPEEALASLYVNFAALYAMQGELDQARQFVA
RALSLVPNSPEATLTAVYVDLKLGKSQEALAKLKQCSRVTFLPSGLTLNKAS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttcgtcttcgtcattaacggttgcgaatcgggacgggtcttcttcagct
tcagaggacgaagctgtcatgtccgtaacccgtgcttacgcgcaggacgccttattgcaa
ttccagtcgggcaagttcgatcagtgcctaaccgccttgtccgagtgcctgaagaggaag
ccaaacgatcccaaaatatttcataatattggacttgcggaattctatcgagatggttgc
tcacatcctaagaggttgctcgatgtacttaatgatgtgaagaaacgaagtgaagagctt
gctcgagcatctgcagaacaggtggagtctggtagcaatattggagggtccagaggaagt
agtacaatgggacatcccttttctgctgtttacatggatgaatttgacacatatgttgct
accttaaacattgcagttatctggttccatcttcacgaatatgcaaaggcattgtctgtc
gttgaacctctgtttcaaaatagaggacctatagatgagaaaactgctcttaatatttgc
cttttgttgctggatgttgggctggcctgtcatgatgcaacgaaatccgctgatgttttg
gtttatctggaaaaagcttttggtgttagctgtatgaatcaaggagacagtggaagcact
gcgttgcaacaacctgcaaacccagttgcaaagtctccatcacttcccaccaattcatca
gccgcggatggtcccaatttggattcagatgcaaatgccttggaggctgaggagacaggc
gagtatgatggtgctgtttttgacatggatgtagcacagccaactgctcttttatcttca
aatgatctttcaaggaacccagttgacatatccgtctcttctgtttatctgaagcttaag
atgcaactttacaaggttcggtttctgcttctcactaggaacttaaagcaagctaaacgt
gaagtgaagcatgctatgaatattgcacgcgggagagattcttctatggctctcctcttg
aagtcccagcttgaatatgctcgtggtaattatcgtaaagccatcaagttgttgatggca
tctagtaatcgaacagatgcaaggatatcaagcatgatcaacaataatctaggatgcatt
tattatcagcttgggaaatatcacacagcatcagtattcttctccaacgcattgcttaat
tgttcatctcttcggaaggacaggcctctaaatctgttaactttttcacaggacaattcc
ctcctaattatatataactctggtatgcagtacttggcctgcgggaaaccactacttgct
gctcgctgttttcaaaaggctggtttagttttctacaaccggcctctgttgtggcttcga
tttgctgagtgctgtctgatggctttagagaagggattattggaaaccactctggcatca
tcagaagtcagagtttatgtcattggcaatggaaagtggaggcaacttgtaatggaagac
ggggtttccaagaatggaaactcgggttcttttgaaagaggtgatttgtttttgggcagt
gatcagcagcctaagctctcgatgtcccttgcacgccagtgtctctctaatgccctgtac
ttactgaactgttctgagtcaagctattgtaagaattctttgccctctaatttcttctta
gaggataatgaattaggtgaagtggcatcttccaagaactcgaacaacaagaactttcac
agcatcgattccgaggcatctgcgttctctgtaggtttgggccagtcaggcataaatggg
gatgcaaaagagcaaaaggcaggaactactcaggagcttgtgcagaactcccttttgtac
tatgcagatattcgtaacaaggaaaatctgttgctcaaacaagctcttcttgcaaatctg
gcatttgtagagttggaattggaaaatcctattaaggccttgtcaattgcaaggtctctc
ttggaacttccagaatgttcaagaatttacatctttttaggtcatgtgtatgctgcagag
gctctctgcttgctgaacagggcaaaggatgctgctgatcatttgatgacatatttgtct
ggaggtaacaacgttgacttgccattcagcgaggaggactctgagcaattgcaaggagtc
agggctgttgattatgaagagttgaatggaggatcaatgagtgccaaaagttcttcccct
gaagacacattaggtatcgtgttcctcaagccagaagaggcactggcaagcctgtatgta
aattttgctgccttgtacgctatgcaaggtgaacttgatcaagcccgccagtttgttgca
cgggcattatccctagtacccaacagtccagaagcaactttgactgcagtttacgtggat
ctcaagctcggtaagtcgcaagaagctcttgccaagttaaaacagtgtagtcgagttaca
ttccttcctagtggattgacattgaacaaagcttcgtag
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