Prunus persica (peach): 18771314
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Entry
18771314 CDS
T03092
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18771314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18771314
03012 Translation factors [BR:
pper03012
]
18771314
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18771314
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
18771314
Translation factors [BR:
pper03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
18771314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
Rad17
ATPase
Motif
Other DBs
NCBI-GeneID:
18771314
NCBI-ProteinID:
XP_007204665
LinkDB
All DBs
Position
G7:12599058..12605463
Genome browser
AA seq
998 aa
AA seq
DB search
MSSRPNIRGGRRGGPNSGGGRRGGSGRGRGGGRGGGEQRWWDPVWRAERLRQQAAEMEVL
DENEWWGKMEQMKNGPEQEMVIKRNFSRNDQQTLSDMAYQLGLHFHAYNKGKALVVSKVP
LPDYRADLDERHGSTQKEIKMSTETADRVGSLLRSSESQGEVSVNVASGSGQGSKQTSAS
VNSSKPVSQLEPDTVKEKEKLSRQLKERQEQMKVSNSLKAMQLFREKLPAFKMKSEFLRA
VSENQVLVVSGETGCGKTTQLPQFILEDEISRLHGADCNIICTQPRRISAVSVAARISSE
RGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVQDPMLTGVSHLLVDEIHERGMN
EDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNCPTIHIPGLTFPVAELFLEDIL
EKTRYIVKSEFDNLEGGNSRRRRRQQDSKKDPLTELFEDVDIDAHYRNYSTSTRKSLEAW
SGSQLDLGLVEATIEHICRHERDGAILVFLTGWDDISKLLDKIKGNRFLGDPTKYMVLPL
HGSMPTVNQREIFDRPPLNKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLA
CLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKMIHDAMLQYQLPEILRTPLQELCLHIK
SLQLGAVGSFLAKALQPPDPLAVQNAIELLKTIGALDDIEGLTPLGHHLCTLPLDPNIGK
MLLMGSIFQCLNPALTIAAALAHRDPFVLPLNRKEDADAAKQSFAGDSFSDHIAVVKAFE
GWKEAKHNGTGKTFCWDNFLSPVTLQMMEDMRIQFLDLLSNIGFLDKSRGANAYNQYSHD
LEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVGKIDIHPASVNAGVHLFPLPYMVYSEK
VKTTNIFIRDSTNISDYALLLFGGSLIPSKTGEGIEMLGGYLHFSASKSVLELIRKLRGE
LDKLLNRKIDNPGLDVSSEGKGVVSAVVELLHSQNVRY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgccccaacatccgaggcggtcgccgaggcggccccaactccggcggaggc
cgccgcggaggcagtggccgaggtcgtggaggtggccgcggcggtggcgaacagcgctgg
tgggacccggtatggcgagccgagcgcctgaggcaacaagcagcggagatggaagtgctt
gatgagaatgaatggtggggaaagatggagcagatgaagaacgggccggagcaagagatg
gtgatcaagcgcaattttagtcgcaatgatcagcaaaccctatctgacatggcttatcaa
ctggggcttcacttccatgcgtataataaagggaaggctcttgtggtcagcaaagttccg
ttgccggattacagagcagatcttgatgagcgtcatggttccacacaaaaagagattaaa
atgtccacggagactgccgacagagttgggagtcttttgcgcagctcagagtcacaggga
gaggtatctgttaatgtggcttctgggtctggccagggaagcaaacaaacttctgctagt
gtaaattcaagcaaacctgtctcccagttagagcctgatactgtaaaggagaaagagaaa
cttagccgtcaacttaaggagaggcaggaacaaatgaaggtgagcaatagtttgaaagca
atgcagttgtttcgagaaaagcttcctgcattcaaaatgaagtctgaatttcttagagct
gtgtcagaaaatcaggtcttggtagtctctggggagacaggttgtggaaaaacaacacag
cttcctcaatttattctagaagatgagatttcacgtctacatggtgctgactgcaacata
atatgcacacaacctcgtcgtatttctgctgtgtctgttgcagctcgtatatcctccgaa
aggggagagaatcttggtgaaactgttggttatcagatccgcctggaatcaaagcgttct
gctcaaacacgactcctattttgcaccactggagtattacttcgacagttggttcaagac
cccatgctaactggcgtgagccacttgctagtggatgaaatccatgaaagaggcatgaac
gaggactttttactaataattttgcgtgaccttcttcctcggcgtccagatctacgatta
attctaatgagtgccaccatcaatgcggacttgttctccaaatactttggaaattgccca
acaatacatataccaggattaactttccctgtggcagaattatttctagaagacattcta
gagaaaactcgttatattgtcaagtcagagtttgacaacttggaagggggaaattccagg
agaagaaggagacagcaagattccaagaaggatcctttaactgaattatttgaggatgtt
gatattgatgctcactacagaaattacagcacatctacaagaaagtctcttgaagcgtgg
tctggttcacagcttgacttgggtctggtggaggcaacaattgaacatatatgtcgccat
gagagagatggagcaattcttgttttccttacaggctgggatgacatttcaaagttactt
gacaaaattaagggaaatagattcctcggagatcctacaaagtatatggttcttcccctg
catgggtccatgcctaccgtcaatcaacgcgaaatatttgatcgtcctcccctcaacaaa
agaaaaattgtgctggctacaaacatagcagagagtagtatcaccatagatgatgttgtg
tatgtcatagactgtggaaaggcaaaggaaaccagttatgatgctttaaacaagttggct
tgtctgttaccatcatggatttcaaaggcttcagcacatcagaggcgagggcgtgctggc
cgtgtgcagcctggagtttgttacagactatatccaaaaatgatccatgatgcaatgctc
caatatcagttacctgaaattctccgaacacctttgcaagagctatgcctccacatcaaa
agtttgcagcttggagctgttgggtcttttttggctaaggcacttcagccaccagatcct
cttgctgttcaaaatgcaatcgaacttctcaaaaccattggagctttagatgacatagag
gggcttactccgcttggtcaccatctttgcacactaccattggatccaaacattgggaaa
atgcttctaatgggttctatctttcaatgcctgaatcctgccttaacaattgcagctgcc
cttgctcatcgtgacccttttgtcctaccattaaataggaaagaggatgctgatgctgca
aaacaatcctttgctggtgattcattcagtgatcacatagctgttgtcaaggcttttgaa
ggatggaaggaagccaaacataacggaacgggaaaaacattctgttgggataacttttta
tccccggtaacgttgcagatgatggaggatatgaggatccagtttctagatctattatca
aatattggctttcttgacaaatccaggggtgctaacgcttacaatcaatacagccatgac
ctggagatggtatgtgcaatcctctgtgctgggctctatccgaatgttgtgcagtgtaaa
agaagaggaaagcggacagcattctatactaaagaagttggtaaaattgatatccatcct
gcatcggtcaatgctggggttcatttattccctctcccttacatggtttatagtgaaaaa
gtgaagacaaccaacattttcattcgagactctacaaatatatcagattatgctttactt
ctgtttggtggtagtcttatccctagcaagactggtgagggtattgagatgcttggaggt
taccttcatttctctgcatcaaagagtgttttagaattaattcggaaattgcgtggtgaa
cttgacaagcttctaaacaggaagattgacaacccaggattggacgtctcaagcgaggga
aagggagtggtttcggctgtggttgagctattgcatagtcaaaatgtacgatattaa
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