Prunus persica (peach): 18771353
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Entry
18771353 CDS
T03092
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18771353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18771353
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
18771353
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Tox-HDC
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
18771353
NCBI-ProteinID:
XP_007202373
UniProt:
M5VQJ8
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Position
G7:10023538..10028296
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AA seq
299 aa
AA seq
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MVLPDASGDVLSEMDVDAFRRLFPLRFFETHLVKSTRPDGRSLAEARETSSALGAVASAD
GSALVKIGSTRMLAAIKMEVMTPSKESPDEGCIAIDFHMPPICSPTVRPGRPAEAAPVVS
KQLSDTISSCGMINLKELSLISRKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
VVSMNDDGKVVVLSGDHGGKEPVNKGKRKLTLSSIPFSLTCLLHKNYILADPTAEEESVM
ETLVTVVLDSSGQLVSLYKPGGPVLAYTSAIQDCVALTRQRARELQTILDEVTSSMEVD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgccagatgcttctggggatgtgctgtcagaaatggacgtggatgctttcaga
cgcctgtttcctcttcgtttttttgagactcatcttgttaaatctacacgacctgatggc
aggtcactggctgaagctagagagacttcttcagcccttggggctgttgcatctgctgat
ggctcagcattagtaaagattggttcaactagaatgttggctgctataaaaatggaggtc
atgaccccttcaaaagaatcaccggatgagggttgcatagcaattgatttccacatgcct
ccaatttgctccccaactgttaggcctggcaggccagctgaggcagcacctgtggtgtcg
aagcagttatctgacactatttcaagttgtggcatgattaatttgaaggagttatccttg
atcagcagaaaggctgcttggatggcctacctggacatatattgtttggatgctgatggt
gctctttttgatgctgctttgctgtcagcagttgctgccttttctcacttgcagattcct
gtagtttctatgaatgatgatgggaaagtagtggttttgtctggagatcatggaggaaag
gagccagtcaataaagggaagaggaaactcacattaagcagtattccattttcattaaca
tgcttgcttcataagaattacatcttggctgaccctaccgcagaggaagagtctgtaatg
gaaactcttgtaactgtggttttggattcatctggtcaacttgtgtctctttacaagcca
ggtggacctgttcttgcctatacatcagctatccaggattgtgttgcactgactaggcaa
agagcgagggagcttcaaacgatcttagatgaagtcacctccagtatggaggttgattag
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