Prunus persica (peach): 18771645
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Entry
18771645 CDS
T03092
Name
(RefSeq) dicer-like protein 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18771645
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18771645
microRNA pathway
RISC loading complex
18771645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
DND1_DSRM
dsrm
PAZ
Cas3-like_C_2
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
18771645
NCBI-ProteinID:
XP_020424721
LinkDB
All DBs
Position
G7:complement(21319240..21332369)
Genome browser
AA seq
1641 aa
AA seq
DB search
MDDAGSTSSPSDQGASSGADDVLVESGAGALKSDKDPRKVARKYQLELCKRALEENIIVY
LGTGCGKTHIAVLLIYELGHLIRKPEKNKCIFLAPTVALVQQQARVIEDSLDFKVGIYCG
SSNQFKNHQDWEKEMEQYEVLVMTPEILLRNLYHCFIKMESIALLIFDECHHAQVQSNHP
YAEIMKLFYKTDDTKLPRIFGMTASPVVGKGASSQANLSKSINSLESLLDAKVYSVEDKE
ELYHFVSSPVITVYNYGPVIRNTSSHYTSYCTKLEQIKRQCIEELSKKTNDYQSVRSAKK
LLNRMHDSILFCLESLGLWGALKASHILLNGDHFERNELMEEEGNNGDDTACVNYLTRAD
DILATDCLRDAIAADLSCVEILKEPFFSRKLLRLIGILSSFRLQQNMKCIIFVNRVVTAS
SLSYILQRLKFLASWKCDFLVGVHSRLMSMSRKKMNIILDKFRSGELNLLIATKVGEEGL
DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVNSGNQKELDLIEKFRKDEDKMN
MEIAFRTSSDTFIGSEDRIYKVDSSGASISSGYSISLLHQYCSKLPHDEYFDPNPKFFFL
DDLGGTICHIILPSNAPIHQIVSTQQSSMEDAKKDACLKAIEELHKLGALSDYLLPQQSN
PNVEELMLDSSDSDSTEDEDSRAELHEMLVPAALKEPWSNSEDHVSLSSYYLKFNPVPED
RIYKSFGLFVKAPLPVEAESMELDLHLAHSRSVMTELVPSGFAEFGKDEILLAQNFQEMF
LKLVLDRTEFVSEFVPLGKHDFSRSSSSTFYLLLPVTLGNNYKIASIDWRTIKKCLSSPV
FRAPGDALGRKSHPSDIRLASGYKSISDVKNSLVYAPYKSTFYFITDVVQERNAYSPYKD
SGTLSYVDHLIKKFHIHLKYPEQQLLHAKPLFCLHNLLHNRKQEDSGPQQLDEYFIDLPP
ELCELKVLAFSKDIGSSISLLPSIMHRLENLLVAIELKHVLSVSFPEGAEVTAERVLEAL
TTEKCQERFSLERLEILGDAFLKFAVGRHFFLLHDSLDEGGLTRKRSNVVNNSNLFKLAT
RSNLQVYIRDQSFEPSQFFALGRPCPRICGKETIGAIDSQGLCSVVNHTNSSEVRCSKGH
HWLYKKTIADVVESLIGAFVVDSGFKAATAFLRWIGIQVDFEPSQVTEVCIASTRYIPLS
ACMDIAALENSLGYQFVHKGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYS
VYPKLKPGQLTDLRSVSVNNKAFANVAVDRSFHKFLICDSGSLSEAIKVYVDFIDTPASE
RGLLDGPKCPKSLGDLVESCLGAILLDTGFNLNRVWEIMLSFLKPIMSFSSLQLSPIREL
RELCQAHTWDLRFLPSKKGKTYSIQATVEGNNVRATASSTSLNKKDAIRICAKLIFAELK
AQGNIPKTKSLEEVLKSSSEMEAKLIGYDETPIDVVLPDVIGFDKLNVQEPCRRNFNSKM
HIKEERNGDSSCIKPVLQPPPSFEAVKIQPSETRGNPSCDANSQAKENLPGGSHKATARA
RLYEICAANYWEPPLFECCNEEGPSHLKLFTFKVVVKIEEAPDMILECFGSPHGNKKAAA
EHAAEGALWYLRNGGYISSSD
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgctggttctacttcttcaccgtctgatcagggtgcctcttctggggctgat
gatgttctggttgaatcgggtgctggagctctgaagtcagacaaggacccgaggaaggtc
gccagaaagtatcaattggagctatgcaagagagctttagaggagaatataattgtgtat
ctagggactggttgtgggaagacccacatagcggtcttgcttatatacgagttgggccac
ttgatacgcaaacctgaaaagaacaaatgcatatttcttgcgcccacagtggctctggtt
caacagcaagccagggttatagaagattcccttgatttcaaggttgggatctattgtgga
agctctaaccaatttaagaatcatcaagattgggagaaagagatggaacaatatgaggtt
cttgttatgacccctgaaatactgctacgtaacttatatcactgtttcattaagatggag
tcaattgcattgttgatttttgatgagtgtcatcatgctcaagtccaaagcaaccatccc
tatgcagaaattatgaaattgttctacaaaactgatgacaccaaacttccccgtatattt
ggcatgactgcgtctccagttgtagggaaaggtgcttcgagtcaagcaaatttatcaaaa
agcatcaatagtcttgaaagtttacttgatgctaaggtttattcagttgaagataaggaa
gaattatatcattttgtctcttctcctgttatcacggtgtacaattatggtcctgttata
aggaacacatccagtcactatacctcttattgtactaagcttgagcagatcaaacggcag
tgtatagaagaacttagtaagaagacgaatgactaccaaagtgtaagaagtgcaaagaaa
ctgttgaacagaatgcatgatagtatactattttgcttggaaagtcttggcctttgggga
gcattgaaagctagtcatattcttttgaatggcgatcactttgaacggaatgaactaatg
gaggaggaaggaaataatggtgatgatactgcatgtgttaattatctgactcgggctgac
gatatccttgctactgactgtttgagagatgccattgcagctgatctatcttgtgtagag
attttaaaggaaccatttttctcaagaaagctcttacgtctgattggaattctttcatcc
ttcaggttgcaacaaaatatgaaatgcataatttttgtaaatagggttgttactgcgagt
tccttgtcatacatactacaacgcctaaagtttcttgcatcttggaagtgtgatttcctt
gtaggagtccactctagattgatgagtatgtcaaggaagaagatgaacatcattcttgat
aagttcagatctggagagttgaatctattgattgcaactaaagttggtgaagaaggacta
gatattcagacttgctgccttgtgatacgatttgatcttccagaaactgttgctagcttt
atacaatcacgaggtcgtgcgcggatgcctcaatctgaatatgcatttttggtaaacagt
ggcaaccagaaggagttagatttaatagaaaagttcagaaaagatgaagataaaatgaac
atggaaattgctttcagaacatccagcgatacatttattggttcagaggataggatttat
aaagtcgattcatctggtgcttccatcagttccggatatagcatctcattattacaccag
tactgctcaaagcttccacatgatgagtactttgaccccaatccaaaattcttttttctt
gatgatttagggggaaccatttgtcatataattttaccttccaatgctccaattcatcaa
attgtcagtacacaacaatcttcaatggaagatgccaaaaaggatgcttgtctaaaagcc
atcgaagaattgcataaattgggtgccttaagtgactatctcttaccacagcaaagcaat
ccaaatgtggaggagttgatgctagactcttctgattctgacagtaccgaagatgaggat
tcacgagcagaactgcatgagatgctagttcctgctgctctaaaagagccatggagtaat
tcggaggatcatgtttccctcagctcgtattatctaaaatttaaccctgttcctgaagat
aggatctataaaagcttcgggctatttgtcaaggcacccctcccagtagaagctgaatcg
atggaacttgatcttcatctggctcatagtagatctgttatgactgagttagttccatct
ggatttgcagaatttggcaaagatgagatattgctggcacaaaattttcaagaaatgttc
ctcaagcttgttcttgaccggacagaatttgtttctgagtttgttccattgggaaagcat
gattttagtcgatcaagctcatcaacattctacctgttgcttcctgtgactttgggtaac
aattataagatagcaagcatagattggaggactatcaaaaaatgtttatcatctccagtt
ttcagggctccaggagatgctttgggcaggaaaagtcatccttcggatatacgacttgca
tcaggttacaaaagcataagtgatgttaagaatagtttagtctatgccccatataagagt
acattttatttcatcactgatgttgttcaagaaaggaatgcctacagcccatataaagac
tcaggcactttaagctatgtggatcatttaattaaaaagtttcacattcatcttaaatac
cctgagcaacagcttctgcacgccaaaccacttttctgtttgcataatttgctacacaac
cgaaagcaagaagattcaggacctcaacaactagatgagtattttattgacttgcctcct
gagctttgcgagttgaaggtattagccttttcaaaagatatcgggagttcaatatctttg
ttaccatcaatcatgcaccgtctagaaaacttgcttgttgccatcgaactgaagcatgta
ttatctgtttctttcccggagggagctgaggttactgctgagagagttctagaagcactc
acaacagagaagtgccaggagcgattttcccttgaaaggcttgagatacttggtgatgct
ttcctcaagtttgcagttggacgacactttttccttttgcacgattcccttgatgaaggt
ggactaacaaggaaacgttctaatgtggtaaacaattccaatttattcaagctagccaca
agaagcaacttgcaggtatacatacgggatcagtcatttgaaccctctcagttctttgct
ttaggccgtccttgcccaagaatttgtgggaaggagacaataggagctattgattctcaa
ggtttatgtagtgttgtaaatcacacaaattctagtgaggtcagatgtagtaagggtcac
cattggttgtataagaaaaccattgctgatgttgttgaatccctcattggagcattcgta
gttgacagtggctttaaagctgcaactgcatttcttagatggattggcatacaagtagac
tttgaaccatcacaagttaccgaagtatgcatagcaagcactagatacatcccactatct
gcttgcatggacattgctgcccttgaaaattcattagggtatcagtttgtccacaaaggt
ttgctcttacaggcatttgtacatccttcttacaacaagcatggaggaggctgctatcag
agattggagtttcttggagatgccgtcttggattacttgatcacctcatacctgtattca
gtttatccaaagttgaagcctggtcaattgacagatttgagatcagtatctgtgaataat
aaagcctttgctaatgttgcagtagatcggtccttccacaaatttctaatctgtgattct
ggtagcctttcagaggctataaaagtttatgtggacttcatcgacacccctgcatcagaa
aggggtcttcttgatgggccaaaatgtccaaagtctctgggcgacttggtggagtcctgt
ctgggtgcaattcttcttgatacagggttcaatttgaaccgtgtttgggagataatgcta
tcctttctgaaaccaatcatgagcttttccagcttgcagcttagtcctattagggaacta
cgggaactttgccaagctcatacatgggatcttcggtttttaccatcaaagaagggtaaa
acatattcaattcaggcaacagtggaagggaataatgttcgtgcaactgcttcctcgact
agcttgaacaaaaaggatgctattagaatttgtgcaaaactgattttcgccgagttgaag
gctcaaggaaatatacccaagacaaaatctttggaggaagtcttaaagtcaagcagtgag
atggaagctaaacttatcggatatgacgagacaccaatagatgttgtgcttcctgatgtg
attggatttgacaaattaaatgtacaagaaccttgccgaagaaattttaattccaaaatg
catatcaaagaagaaagaaatggtgactcctcctgcattaaacctgtactgcaaccccca
ccttcatttgaagcagtcaaaatacaaccaagtgagaccaggggaaatcccagctgtgat
gctaactcacaagccaaagaaaatcttccaggcggatcacacaaagcaacagcaagagct
cgtttgtatgaaatctgtgctgcaaactattgggaaccacctttgtttgaatgctgcaat
gaagaaggaccaagccacttaaaattgttcaccttcaaggttgtagtaaagatagaagaa
gctccagatatgatattagagtgttttggatcacctcatgggaacaagaaggcagcagca
gagcatgcagcagaaggggcactttggtacttgagaaacggagggtatataagtagtagc
gactaa
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