Prunus persica (peach): 18771998
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Entry
18771998 CDS
T03092
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18771998
03015 mRNA surveillance pathway
18771998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18771998
03041 Spliceosome [BR:
pper03041
]
18771998
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
18771998
Spliceosome [BR:
pper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
18771998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
18771998
NCBI-ProteinID:
XP_020422403
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Position
G6:complement(4817893..4828131)
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AA seq
851 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDISKVNMEVMHPWIAKRVTDLL
GFEDEVLINFIYGLLEGKVVNGKEVQISLTGFMEKNTVKFMKELWTLLISAQNNASGVPQ
QFLDAKQEEARTKKEEADRFANEIQRKKDKERMDQQEILKKMEGGVDKKSSNIALEPNSK
HMSPRTSNDRSEDERGNEKRNGVKARNKVSRSPNSGNSSLSPSERRRSKSVSKSPKARRR
SISSERGYRSPPRRPITTLRRHSPEGSLSPRGRSPYSRRRSRSYSPQRSPSPYRRRLRSP
YRHRSPSPGRRRTPPPIRRRRSPSPVRRRRSPSPIRRRRSPSPVRRRRSPSPVRRRRSPS
PVRRRRSPSPLRRRMSPSPVRRRRSRSPVHRRSPSPARRWYRRSPLTSRRRSPVRGGRRS
PTPRNRSPSPYVRSSASPIQNGSPSPIRGTKYQRSPSQSPQERTRSQFSPVPRQSSSSPG
SLQRESKKEKDSRKRAPDLSPSPEKSRILSESPPGVRSASEERRSSSPYESPVRRPREQM
TRNISSSPPRKPREQKLRRGSPEISEEEDGDDRPKSTERRSKNTSVISKPIVSPAKVHNK
EDYSPERVASGHRYTESRSRLDNMEFRNKEQEMRSGKSSGRGAPGTPEQQKAATMSKDSL
PGETQQASYPNEGRRTDDKNRSHSKNSKDSERHHKPGSVHSSVEKVDHINQSGTFDSGSE
ESDKCRGGDKEKRKNKRSERQAVTSDDDYSNDSEIEDKKGSKRRRKEEKRLRKEKKRRRR
EERRRRKEERRAEKLKGKNYSDASASGGEHVGRRELHSSDNEEAEAIQKKLEIELRKKAL
ESLKAKKGINH
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggttcttcaggggtacatctgctgatcaggacacaaggttttccaataag
caagctaagctgttgaaatctcagaagtttgcacctgaattggagcatttggtggatata
tcgaaggtgaatatggaggttatgcacccgtggattgctaaacgggtaacagaccttctc
ggtttcgaagacgaagttcttatcaactttatttatggtcttttggaaggaaaggtagtg
aatgggaaggaagttcaaatttcgcttactggatttatggagaaaaacactgtgaagttt
atgaaagagctttggacgcttcttatcagtgcacaaaacaatgctagtggtgtccctcaa
cagttcttggatgccaaacaagaagaagcacggacaaagaaggaggaggcagacaggttt
gcaaatgaaattcagagaaagaaagataaggagaggatggatcaacaagagatattgaag
aagatggaaggaggggttgataagaaatcaagcaatattgcgttggagccaaactcaaaa
catatgtcaccaaggacttcaaatgatcgttctgaggatgaaagaggaaatgaaaagcgc
aatggtgtgaaggcaaggaacaaggtttcaagatctccaaattcaggaaattcatctctg
tctcctagtgaaagacgtcggtcaaaaagtgtttccaagtcaccaaaagcacggagacgg
tccatttcttcggaaagaggttatcgctctccaccaagacggcctattacaactcttcgg
aggcattcacctgagggatcactctcgccgagaggaagatcaccttattcgaggcgaaga
tctagatcatattccccacaaagatcaccctctccttatcggcgtagattacgttctccc
tatcggcatagatcaccttctcctggtcgtcgtcgaacgcctccacctattagacgtcgg
agatcaccctcacctgtccgacgtcgcagatcaccctcacctatccgacgtcgcagatca
ccctcacctgtccgacgtcgcagatcaccctcacctgtccgacgtcgcagatcaccctca
cctgtgcggcgtcgcaggtcaccctctcctttgcgacgtcgcatgtcaccttctcctgta
agacgtcgcagatcccgctcacctgtgcatcgcagatctccctcacctgcacgacggtgg
tatcgaagatctccattgacttcacgtaggagatctccggttcgtggtggtaggagatca
ccaactcctcggaataggtctccttcgccttatgtccgaagttctgcatctcctattcag
aatggttccccttcaccaatcagggggacaaagtatcagagatctccatcacaatctcct
caagaaagaaccaggtcccaattttctcctgtgccacgtcagtcctctagctctcccgga
tcactgcagagggagtcaaagaaagagaaagattctcgtaaaagagcaccagatttgtcg
ccatcaccagagaagtctcgcatactgtcagaatctccaccaggtgtaaggagtgctagt
gaagaaaggagatcctctagtccttatgagagtccggtgcgacgaccaagggagcaaatg
actcgtaatattagctcaagtcctccaaggaaaccaagagaacaaaagcttcgtcgtgga
agtccagaaataagcgaagaggaggatggtgatgatagacctaagtccacagagagaaga
tcaaaaaatacatcagtgatcagtaagccgatagtttctcctgctaaggttcataacaag
gaagactactctcctgaaagagtagcatctggtcatagatatactgaatctcggagtcgt
ctggataatatggaattcagaaacaaagagcaggagatgaggagtgggaaatcttctggg
aggggtgcccctggaactcctgagcaacaaaaagcagcaaccatgtcaaaggactctctg
cctggtgagactcaacaagcatcatatcctaatgaaggtagaaggactgatgataagaac
cgctctcattcaaagaattccaaggacagtgagcggcatcacaaacctggatctgtacac
tcttcagttgaaaaggttgatcatattaatcaaagtggcacttttgattctggttctgag
gaaagtgacaaatgcagaggtggggataaggaaaaaagaaagaataagagatcagagagg
caagcagtgacttcagatgatgattacagtaatgattctgaaatagaagacaagaagggt
tctaaaaggaggaggaaagaggaaaagagattgcggaaggagaagaagcgccgaagacgt
gaggagcgacgccgcagaaaagaagaacgtcgtgcagagaagctgaagggaaagaattac
agtgatgcttctgcttcaggtggtgaacatgtaggcaggagggagcttcattcaagtgac
aatgaagaggcagaggctattcagaagaaacttgagattgagttacgcaagaaggctctt
gaatcacttaaagcaaagaagggcatcaatcactaa
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