Prunus persica (peach): 18772045
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Entry
18772045 CDS
T03092
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18772045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18772045
03009 Ribosome biogenesis [BR:
pper03009
]
18772045
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18772045
Spliceosome [BR:
pper03041
]
Complex A
U1 snRNP components
U1 related factors
18772045
Complex B
18772045
Ribosome biogenesis [BR:
pper03009
]
Eukaryotic type
Pre-60S particles
Helicases
18772045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
18772045
NCBI-ProteinID:
XP_007208448
UniProt:
M5W7C8
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All DBs
Position
G6:complement(3007039..3013455)
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AA seq
568 aa
AA seq
DB search
MSYVPPHLRSSSTTTTTTTETSSVTLDDQSKLSYPSSNSHFNNDKSSAASFSSFSHSNAS
RWSSGSISTANRALARPDAVVPQWKPSERVLRMKPELIEEVCLRLNLDVSVSPDSAPAPA
PIESFADMCLHASIMKDIAYHGYTTPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFAIP
MIQHCLAQPPVQRGDGPLALVLAPTRELAQQIEKEVKAFSKSLESFRTAIVVGGTNIAEQ
RSELRAGVDVVVATPGRFIDHLQQGNTSVTRISFVVLDEADRMLDMGFEPQIREVMRNLS
EKHQTLLFSATMPEEIEELAQEYLTNPVQVKVGKVSSPTANVTQTLEKVSESEKTDRLLA
LLVEEASRVERSGHPFPLTIVFVERKTRCDEVADALVAQGLHAVALHGGRTQGEREAALR
EFRKGTTNILVATDVASRGLDVSGVAHVINLDLPKSMEDYVHRIGRTGRAGSMGQATSFY
TDRDMFLVANIKKAIADVGSGNAVAFATGKTARRKEREAAAAQKHARVALSKCSITGPTS
VNIEDKYRFMIADSNSKREGAADSAWDD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtgcctccacacctaaggtcaagctcaacgaccaccacaaccaccacagaa
acctcatctgtaaccctagacgatcagagcaagctctcgtacccctcctccaactctcac
ttcaacaacgacaagtcgtccgccgcttccttctccagcttctcgcactccaatgcctcg
cgctggagctccggctctatctccaccgccaacagagctctcgcccggcctgacgcagtc
gtccctcagtggaagccctccgaacgcgtcctccgcatgaagcctgaactgattgaagag
gtttgtttgcggcttaatttggatgtttctgttagtccagactctgctcctgctcctgca
ccaattgagtcttttgcagatatgtgtttgcacgctagcatcatgaaagatattgcatac
catggatacaccacgccaacatccattcaggctcaagccatgccagttgccctcagtggg
agggacctattaggttgtgctgaaactggcagcgggaaaacagctgcattcgccatccca
atgatacagcattgcttggctcaacctcctgttcaacgtggtgatggaccactagctttg
gtattggccccgactagagagcttgcccaacaaatagaaaaagaggtcaaagcttttagt
aaatctcttgagtccttcagaactgccatagttgtgggtggaaccaacatagctgagcag
aggtctgagctacgagcaggagttgatgtggtggttgctactcctggacgatttatagat
catttacaacaagggaatacttccgtcactagaatttcatttgtcgttctggatgaggct
gacaggatgcttgacatgggttttgaaccacagataagagaggtgatgcggaacctttct
gaaaagcatcaaactttgctatttagtgcaactatgcctgaagagattgaagaattagcc
caggaatacttaactaacccagtgcaagtgaaggtgggaaaagtgagtagccccacagca
aatgtaactcagactttggagaaggtttctgagagtgagaagactgataggcttttggct
ttgctcgtagaggaggcatctcgggttgaaagatctggccatccctttcccttaactatt
gtatttgttgaaaggaagacgagatgtgacgaggttgctgatgccttggtagcacaaggg
ttgcatgcagttgctcttcatggtggtcgtactcagggtgaaagagaggctgctctacgt
gaatttagaaaaggcactaccaatattttggtcgccactgatgttgcatctcgtggtttg
gatgtctcaggagttgctcatgttatcaatttggatcttccaaagagcatggaagattat
gtacaccggattggaaggacgggaagagcaggatcaatgggacaagctacttccttttac
actgatcgtgatatgttccttgtggcaaatataaagaaagcaatcgcagatgttggatct
ggaaatgctgtggcttttgcaactggaaagactgcaagaaggaaagagagagaagcagca
gctgctcaaaagcacgctagggttgctctatcaaagtgctcaataacgggacccacatcc
gtaaacattgaggacaagtataggttcatgattgctgattccaacagtaaacgagaaggt
gctgcagatagtgcttgggacgactaa
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