KEGG   Prunus persica (peach): 18772089
Entry
18772089          CDS       T03092                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pper  Prunus persica (peach)
Pathway
pper03082  ATP-dependent chromatin remodeling
pper03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    18772089
   03083 Polycomb repressive complex
    18772089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pper03036]
    18772089
Enzymes [BR:pper01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     18772089
Chromosome and associated proteins [BR:pper03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     18772089
   HDAC complexes
    Sin3A-HDAC complex
     18772089
    BRAF-HDAC complex
     18772089
    REST complex
     18772089
    SHIP complex
     18772089
    MiDAC complex
     18772089
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     18772089
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    18772089
  Chromatin remodeling factors
   NuRD complex
    18772089
SSDB
Motif
Pfam: Hist_deacetyl Plasmod_MYXSPDY
Other DBs
NCBI-GeneID: 18772089
NCBI-ProteinID: XP_007205234
UniProt: M5WAZ3
LinkDB
Position
G6:9111645..9118634
AA seq 430 aa
MRSKDKIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDMFFPGTGDVKEVGEREGKFYAINVPLKDGIDDTSFNRLFKT
IISKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDSELPNEIPENEYIKYFSPDFSLRIPNGHIENLNSKSYISTIK
MQVLENLRCIQHAPNVQMQEVPPDFYIPDFDEDAQNPDERVDQHTQDKHIQRDDEYYEGD
NDNDHNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgctcaaaggacaaaatcgcctatttttacgacggggatgtgggtagcgtctacttt
ggaccaaaccatcccatgaaaccacaccggctatgtatgacccatcatcttgtcctctca
tatgacctccacaagaagatggaaatttatcggccccataaggcgtatccggtggagctt
gcgcaattccattcagctgactatgttgagtttctacatcggattacgcccgacacacag
cacttgttctcgaatgaactggcaagatataatcttggagaagattgccctgtatttgat
aacttgtttgaattttgtcaaatttatgccggtggaacaatagatgctgcacgtaggttg
aacaataaactttgtgacattgctataaattgggctggcggactacaccatgccaagaag
tgcgaggcatccggattttgttacatcaatgacttggtcttggggatcttggagcttcta
aaacatcatgcccgagtattgtacattgacatagatgtgcatcatggtgatggcgtagaa
gaagctttttattttactgatagggtgatgacggttagttttcacaaatttggggatatg
tttttcccaggaacgggtgatgttaaggaagtaggagaaagagaaggaaagttttatgcc
atcaatgtcccactgaaggatggaatagatgacactagcttcaatagactttttaagact
attatttccaaggttgttgaaacatatctaccaggcgtgatagttctccaatgtggggca
gattctcttgctggagaccgcttgggctgcttcaatctctccattgatggtcatgctgaa
tgtgttaggtttgtgaagaaattcaatttacccttactggttacaggaggcggtggatac
acgaaagagaatgttgctcggtgttggactgttgaaactggagttcttcttgattcagaa
cttcctaatgagatcccagaaaacgagtatatcaagtatttttctcccgacttctctttg
aggattccaaatggacatatagagaacctaaatagtaaatcgtatattagcacgattaaa
atgcaagtcttggaaaatctccgttgcatccaacatgctcctaatgtacaaatgcaagag
gttccacctgacttttatattcccgattttgatgaagatgcgcagaaccctgatgaacgc
gtggatcagcacacccaagacaagcacattcagcgtgatgatgaatattacgaaggagac
aatgataatgatcacaacatggatgatgtgtaa

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