Prunus persica (peach): 18772231
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Entry
18772231 CDS
T03092
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pper04131
]
18772231
Membrane trafficking [BR:
pper04131
]
Protein recycling
Others
EARP complex
18772231
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
DUF5667
Motif
Other DBs
NCBI-GeneID:
18772231
NCBI-ProteinID:
XP_007204954
UniProt:
M5WA79
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Position
G6:complement(8287051..8302415)
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AA seq
1124 aa
AA seq
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MQQNLFPFGSVLGNPFLFNGDLSEGLESPGVLFLVPFLLFQGGEMDLSKVGEKILSSVRS
ARSLGLLPSASDRPEVPARAAAAAAVARAIAGLPPHQRFGLSSSSQELSSIYGSTPQGPV
VEEIEEEFYEEDFDPVRHILEHIPSEENELTYFERRATLRLAQLDRVAERLSRNVMEHHE
VMVKGMHLVRELEKDLKVANVICMNGRRHLSSSRNEVSRDLIVNSNSKKKQALLDMLPVL
TELRHASEMQAELENLVEEGNYCKAFQVLSEYLQLLDSFSELSAVQEMSRGVEVWLGKTL
QKLDSLLLGVCQEFKEEGYITVVDAYALIGDISGLAEKIQSFFMQEVLSETHSILKNIVQ
EDKGVHMQNSRLTYSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMGFQLGNKDAASK
TSSMTHKESEISQTPGGVQQILSPCSSQKVNGSLLESVDIMHDSSYIEESTNISSSVEST
GNTSSMCTSSGNLVDDEARKDDSAASTSGSPWYQLRKDATAFVSQTLQRGRKNLWQLTTT
RVSVLLSSASVSSASIHQFLKNYEDLSVFILAGEAFCGFEATDFRQKLKAVCENYFVAFH
RQNIYALKMVLEKEIWLIMPPDTVQEITFPGLLGDGAPLIVPSDGNSTNARVLHSDKSTK
LVDTGVKKSGFSNWLRNGNPFLLKLTHTSKEGLKWNGAISGEIDGNFSERLGDKVSPRKS
DGSHSNGANSVLEEENEDLLADFIDEDSQLPSRISKPKLLRNQSSHYNDGDIIAQTGSSI
CLLRSMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFAQQNSNSGGKGSPDPINY
RLKTALSRIQQDCDQWIRAPSSSPTSLNSAFAHTDITPMSPPSTNFGNTPGTSVGLKERC
AGADTISLVARMLHRSKAHLQTMLLQNNGAVVEDFYVHLVDAVPDLIEHIHRTTARQLLH
INGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRREVQDLLLEYGLKI
VSQTLIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSMNVKPHLQIVEAFIKAYYLPE
TEYVHWARAHPEYTKNQIVGLVNLVASMKGWKRKTRLEVLEKIE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaatctgtttcccttcggcagcgttttgggaaatccgtttttgttcaatgga
gatttgagcgagggcttggagagtcctggggttttgttcttggtcccctttttgttgttc
caaggtggtgagatggatttgtctaaggtcggcgagaaaattctgagctccgttaggtct
gccagatcgcttggccttcttccttctgcttctgatcgccccgaggttcccgcgcgagct
gcggctgctgcagctgttgctcgtgctattgccggactgcctccacaccaaaggtttggt
ctctcatcaagctctcaagaactgagctcaatatatggaagcacaccgcaaggtccagta
gtggaggagatagaggaagaattttatgaagaggattttgatccagttagacatattctg
gagcatattccatctgaagaaaatgaactgacttattttgagagacgggccactcttaga
ttagcacaactggatagagtagcagaacgtttatcccgcaatgttatggaacatcacgaa
gttatggtgaaggggatgcatttagtcagggaattggagaaagacttgaaagttgcaaat
gtcatctgcatgaatggacgacgtcatcttagctcatcaaggaatgaggtttctagggat
ctcatcgtgaattccaattccaaaaagaaacaagctcttctggacatgcttcctgtgtta
actgagcttcgtcatgcatcggagatgcaagcagaacttgagaatcttgttgaggaagga
aattactgcaaggcctttcaagtcctgtctgagtatttacagctgttagatagtttttca
gaactttctgcagtacaagagatgagtcgtggtgtagaggtttggctgggaaaaactctt
caaaagctggattcattgttgctaggagtgtgccaggagtttaaagaggagggctatata
actgtggttgatgcttatgcactaattggggatatctctggtcttgctgagaagatacaa
agtttctttatgcaggaagttctctcagaaacccactctatattgaagaatattgtgcaa
gaggataagggagttcacatgcaaaatagtcgacttacctacagtgatctatgccttcag
atacctgagcctaagtttaggcagtgtttgttaaatacgctagctatcctattcaagttg
atgtgttcatatcatgaaatcatgggatttcagctgggtaataaggatgcagcaagtaaa
acttcaagcatgacgcataaggaaagtgaaatctctcagactccaggaggggttcagcaa
attttgtctccttgctcttcccaaaaagttaatggctctctcttggaatctgtagatata
atgcacgattcatcttatatagaggaatctacaaatatcagctcttcagtcgagtctact
ggaaacacatcttcgatgtgtactagttctggcaatttagttgatgatgaggctcggaag
gatgacagtgcagcatcaacaagtggatccccatggtaccaactgcggaaagatgccaca
gcatttgtttcacaaacccttcagaggggacgcaaaaatctctggcaacttacaactact
cgtgtatcagtcttgctttcttctgcttcagtttcttctgctagcatacaccaattcttg
aaaaactatgaagatctgagtgtcttcatcttggctggagaagcgttttgcggatttgaa
gcgactgacttcaggcagaagttaaaggcagtttgtgaaaattattttgtagcttttcat
cggcagaatatatatgcgcttaaaatggtgttggaaaaagaaatttggttgataatgcca
ccagatacggtacaagaaattacatttcctgggcttcttggtgatggagcacctctaatt
gttccatctgatggtaactctactaatgccagggttctacattctgacaagtctaccaaa
ctggttgatactggtgtgaagaaaagcgggttctctaattggcttagaaatggaaaccca
tttttgctaaagctgacacatacttccaaagaaggtcttaaatggaatggtgccatttct
ggtgaaattgatggaaattttagtgaaaggcttggtgataaggtctctccacgaaagagt
gatggaagtcattcaaatggtgctaattctgttctggaagaagaaaatgaagatcttctt
gcagactttattgatgaggatagtcaactcccaagtcgaatttccaaacccaaactcctg
agaaatcaatcctcacattataatgatggagatataatagcccaaactggatcatctatt
tgtcttctaaggtcaatggataaatatgccaggcttatgcagaaattagaaatagttaac
gttgagttcttcaaggggatatgccagttgtttgaggtattttttcattttgtatttgaa
acatttgctcagcaaaacagcaattcaggtggaaaaggctcgcctgaccctattaattat
cggctgaagacagcattgtccagaatacaacaggactgtgaccagtggataagggcccca
tcatcttcacccacatctttgaattcagcatttgcacacacagacataacacctatgagt
cctcccagtacaaactttggtaacacaccaggaacatccgtcggtctcaaggaaagatgc
gcaggtgctgacaccatctcacttgttgctcgaatgttgcatagatccaaggctcatctc
cagacaatgcttcttcagaataatggtgctgtagttgaagacttctatgtgcatctggta
gatgctgtaccggatcttatagagcacattcataggacaacagcaagacaactgctccat
attaatggttatgttgatcggattgccaatgcaaaatgggaagtaaaagagcttggacta
gagcataatgggtatgttgacttgttgttgggagaatttaagcactataaaacaaggctt
gctcatgggggaattcgcagggaggttcaagatctcctcttagaatatgggcttaaaatt
gtttcccagactctcattgaaggcctctcacgtgtcaagaggtgtacggatgaagggcgg
gctctcatgtcattagatcttcaggttttgatcaatggcctccaacattttgtttccatg
aacgtgaagccccacttacaaattgttgaagcgttcatcaaggcatactatcttccagaa
acggaatatgtgcactgggcacgtgctcacccggaatacacaaaaaatcaaattgttggg
ttggtcaaccttgttgcctctatgaaaggttggaagagaaaaaccagattggaagtgctg
gaaaagattgaatga
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