KEGG   Prunus persica (peach): 18772908
Entry
18772908          CDS       T03092                                 
Name
(RefSeq) WD repeat-containing protein VIP3
  KO
K12602  WD repeat-containing protein 61
Organism
pper  Prunus persica (peach)
Pathway
pper03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18772908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pper03019]
    18772908
Messenger RNA biogenesis [BR:pper03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     18772908
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_NOL10_N Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st DSE1_N Beta-prop_Aladin Beta-prop_EIPR1 NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_TEP1_C eIF2A WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Cytochrom_D1 Ge1_WD40 Beta-prop_WDR41 Beta-prop_WDR75_2nd TRM82_WD CFAP251_N Beta-prop_ACSF4 Beta-prop_WDR11_1st Tricorn_2nd PD40 ASA1 WDR54 DUF5711 PEP5_VPS11_N Beta-prop_MIP2
Other DBs
NCBI-GeneID: 18772908
NCBI-ProteinID: XP_007205583
UniProt: M5VZ91
LinkDB
Position
G6:complement(18758866..18762292)
AA seq 317 aa
MKLAGLKSIEDAHEESVWAVTWVPSTETRPALLLTGSLDETVRLWQPDELVNQGKMTGHC
LGVASVAAHPSGHIAASASLDSFVRVFDVDSNNTIASLEAPPSEVWQLRFNPQGTMLAVA
GGGSASVKIWDTTTWNLFATLSIPRPEGTKPTDKSSSKKFVLSVAWSPDGRRIACGSMDG
TVSVFDADRGKFLHHLEGHFMPVRSLVFSPVEPRLLFTGSDDTHVHMYDAEGKTLVGAMS
GHASWVLSVDVSTDGAALATGSSDRTVRLWDINMRGAVQTMSNHTDQVWGVAFRPGGMPG
RLASVSDDKSISLYDYS
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaagcttgcagggttgaaatcaatcgaggacgcgcatgaggagtcagtatgggcggtg
acatgggtcccgtcaacggagacccgacctgctttgttgttaaccggatcactggacgag
accgtgaggctgtggcagccagacgagctagtcaaccagggcaagatgaccggccactgc
ctcggtgtcgcttcagtggcagctcacccctctggccatattgctgcctcggcttcactc
gacagctttgttagggttttcgatgtcgactccaacaacaccatcgctagtctcgaagcc
cccccctctgaagtctggcaattacgcttcaatcctcagggtaccatgctagctgtggcg
ggtgggggaagtgcatcagtcaaaatttgggacaccaccacatggaatctctttgccaca
ttgtcaattcctcgcccagaaggaaccaagcccacggataaaagcagcagcaagaagttt
gtgctatcagttgcctggagtcctgatggtagacgcatagcttgtggatcgatggatgga
actgtttctgtttttgacgcggatcgtggcaagttcctgcaccatctggaaggccacttc
atgcccgtgaggtctcttgtgttttctccagttgagccacggttacttttcacgggctca
gatgacacccatgtgcacatgtatgatgctgaggggaaaacattggttggggccatgtca
ggacatgcgagctgggttctgagtgtggatgtgagcacagatggggcggctcttgcaacg
ggctcaagtgatagaactgtgaggctgtgggatatcaacatgaggggagctgtgcagaca
atgagcaaccacactgaccaagtttggggagtggccttccgaccaggaggaatgcctggt
agacttgctagtgtgtcagatgacaagagcatatcgttatatgactactcttga

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