Prunus persica (peach): 18773700
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Entry
18773700 CDS
T03092
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18773700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18773700
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18773700
Spliceosome [BR:
pper03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
18773700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
AAA_22
DEAD
AAA_19
PWI
T2SSE
AAA_30
nSTAND3
Cas3-like_C_2
AAA_16
SRP54
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18773700
NCBI-ProteinID:
XP_007208575
UniProt:
M5W7T5
LinkDB
All DBs
Position
G6:complement(14668076..14675058)
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AA seq
1052 aa
AA seq
DB search
MGSESNLNTWVSDKLMTLLGYSQPTVVQYIIGLTKQAKSPADVVGKLVELEFGLSSSAET
SAFAEDIFARVPRKESGLNLYQKQEREAAMLVKKQKTYSLLDADDEDDNDGDTSSAQVIS
KSRKADSHKKRFRKKVLSQEDEDDEVIAQEGQVRRVKRRTCSPDDDDGSESEEERLRDQR
EREQLEQNIRERDTAATRKLTDRKLTRKEEEENIRRSNALERNDLEDLRKVSRQEYLKKR
EQKKLEEIRDDIEDEQYLFDGVKLTEAEYSELSYKKQIYELVKKRSDEVEDITEYRMPDA
YDEEGGVNQEKRFSVAVQRYRDLSAGDKMNPFAEQEAWEDHQIGKATLKFGSKNKKQKSD
EYQFVFEDQIDFIKASVMDGDEFDDDRQPSELLGSKAKSGLEKLQDDRKTLPIYTYRDKL
LEAVENHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKIGCTQPRRVAAMSVAARVSQEM
GVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLST
DILFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYAVDIHYTKAPEA
DYLDAAIVTALQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYA
NLPTELQAKIFEATPDGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESL
LVTPISKASAMQRAGRSGRTGPGKCFRLYTAYNYYNDLDDNTVPEVQRTNLANVVLTLKS
LGIHDLLHFDFMDPPPSEALLKALELLFALSALNKVGELTKVGRRMAEFPLDPMLSKMIV
ASDQYKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHIALLKVYNSW
KETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELVSNLSDYETIKKAITSGFF
PHSAKLQKNGSYRTVKHPQTVHIHPSSGLSQVLPRWVIYHELVLTTKEYMRQVTELKPEW
LVEIAPHYYQLKDVEDSMSKKMPRGEGRPQQD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgagagcaatctgaatacatgggtatccgataagttgatgacgttgctcgga
tattctcagcctactgttgttcagtacattattggattgaccaaacaggcaaaatcaccg
gctgatgttgtgggcaagcttgtagaattagaatttgggttgtcatcttcggccgaaaca
agtgcatttgctgaagacatcttcgcaagagtgccccgtaaagaatctggtttgaatcta
tatcagaaacaagagagggaagctgccatgttggtgaagaagcagaagacatattctctc
ttggatgcagatgacgaagatgacaatgatggcgatacatcttctgcccaggttatttcc
aagtccaggaaagctgattcccataagaaacgattcaggaagaaggtcttgagtcaagaa
gatgaagatgatgaggtgattgcacaagagggacaagtgagacgagttaaaagacgaact
tgttccccagatgacgatgatggttcagagtcagaagaggaaagattgcgtgatcaaaga
gagagggagcaattggagcagaatataagggaacgggatacagcagctacacgaaagtta
acggacagaaaattaacacgaaaggaagaagaggagaatattcggagaagcaatgcattg
gagcggaatgacctcgaagatttaagaaaagtttcaagacaagaatatctcaaaaagagg
gagcaaaagaaattggaggaaatcagagacgatatagaggatgagcaatacttatttgat
ggcgtgaagctcactgaagcagaatatagtgaactaagctacaagaaacaaatatacgaa
ctggtgaagaagaggtcagatgaggttgaggatatcactgagtacaggatgccagatgcg
tatgatgaggagggtggtgttaatcaggaaaagagattttctgtggctgtgcaacgatac
agggacctcagtgctggggataaaatgaacccatttgcagaacaggaagcttgggaggat
caccaaattggaaaagcaacgctgaaatttggttcaaaaaacaaaaaacaaaaatctgat
gagtatcaatttgtatttgaggatcagattgattttatcaaggcatcagtgatggatggt
gatgagtttgatgatgacaggcaaccctctgagttacttgggtcgaaggcgaaatcgggc
ttagagaagctccaggatgacagaaaaacactacccatctacacctaccgtgataaattg
cttgaagctgttgaaaatcatcaagttctggttattgttggggaaactggttctggaaaa
actacgcagataccccaatatcttcatgaggctggatacacaaagcgtggaaagattggg
tgcacacagccacggcgagttgctgctatgagtgttgctgcaagggtttctcaagaaatg
ggggtcaaacttgggcacgaggttggttattctattcgttttgaggattgcacatccgaa
aagactgttttgaaatatatgacagatggaatgttgttgcgagaattccttggtgaacca
gatctggcgagttacagtgtggtgatggtggacgaggcccatgaacgaacactctcaact
gatattctatttggactagtgaaggatattgctcgatttagaccagatctcaaactgctt
atctcaagtgcaacgcttgatgctgagaagttcagtgattattttgattctgctccaatt
ttcaaaattccagggaggcggtatgctgttgatatccattacacgaaagcaccagaagcc
gattacttagatgcagcaattgtcactgcacttcaaatccatgtgacgcaaccacctgga
gatatattggtattcctcactggtcaggaagagattgaaacagcagaagaaatattgaag
cacagaacaaggggcctagggacaaaaattgctgagctgattatttgccccatatatgca
aacctacctactgagctgcaagcaaaaatttttgaagccacacctgatggggcaaggaag
gttgtccttgccacaaatatagctgaaacttcgttgaccattgatgggatcaaatatgtt
attgacccagggttttgcaagatgaagtcgtataacccaaggactggaatggagtcattg
ctagttactcccatctcaaaggcatcagcaatgcagagggcaggtcgatctggtcgaacg
ggtcctggaaagtgcttccggttatatactgcctacaattattacaatgatttagatgat
aacacagtaccagaagtacaaagaactaatcttgcaaatgttgtgcttacgctgaagagc
cttggtattcatgacttattgcattttgattttatggaccctccgccatctgaagcgtta
ctgaaagccctggaactgttatttgcactaagtgcattaaataaagtgggtgagttgact
aaagtgggtagaaggatggcggagtttcctcttgatcccatgctatctaagatgatagtt
gcttctgatcagtacaagtgttcagatgaagtcatttccattgctgccatgctttccatt
ggtaattccatcttttaccgtcccaaggacaaacaagtccatgctgacaatgctcgtttg
aattttcacaccgggaatgtgggagatcacattgcattgctcaaggtctataactcatgg
aaagagaccaacttctcaacccagtggtgttatgaaaactatatacaggtgaggagcatg
aagcgtgctagagatattagagaccagcttgagggactcttggagagggttgagattgag
ctggtctcaaatctcagtgattacgagaccataaagaaggccattacatctggcttcttc
cctcattccgcaaagcttcaaaagaatggatcttatagaacagtcaaacatccacagact
gttcatatacatcccagctcagggctgtcacaggtgcttccgagatgggttatataccat
gaattggtacttacaaccaaggaatatatgagacaggtaacagaattaaagccggagtgg
ttagtggaaatagctcctcattattaccagctgaaggatgttgaagattcgatgtcaaag
aaaatgccccggggagaagggcgcccacaacaggattga
DBGET
integrated database retrieval system
