KEGG   Prunus persica (peach): 18774206
Entry
18774206          CDS       T03092                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
pper  Prunus persica (peach)
Pathway
pper03420  Nucleotide excision repair
pper04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18774206
  09124 Replication and repair
   03420 Nucleotide excision repair
    18774206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pper04121]
    18774206
   03400 DNA repair and recombination proteins [BR:pper03400]
    18774206
Ubiquitin system [BR:pper04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     18774206
DNA repair and recombination proteins [BR:pper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      18774206
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_EIPR1 WD40_Prp19 WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I PQQ_3 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 18774206
NCBI-ProteinID: XP_007208596
UniProt: M5WSK6
LinkDB
Position
G6:complement(4054626..4059565)
AA seq 552 aa
MPPQTRRMAFPKVVIERETDSEQSSSEEDEADVEQEEEEVLESENEGKVEQALDEKKKGK
APITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTVACPHRVATEYGVV
PAPHKSTRNALEYMFERQIRPRVPPIKPAFVIPDQVSCAVIRYHSRRVTSLEFHPTKNNI
LLSGDKKGQLGVWDFVKVHEKIVYGNVHSCILNNMKFKPASDDTVYAASSDGTISCTDLE
TGISVSLMNLNPDGWQGQNSWRMLYGMDINAEKGAVLVADNFGFLYLVDTRSNDPTGKPI
LIHKKGSKVVGLHCNPVQPDLLLSCGNDHFARIWDIRHIEAGSSIYDLAHSRVVNSAYFS
PVSGSKILSTSQDNRLRIWDSIFGNMDSPSREIVHSHDFNRHLTAFKAEWDPRDSSESLA
VIGRYISENYDGAALHPIDFIDVSTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRS
LFIWKPKEKCEPVEQKDEGKIVICAGAEKKRNRKLGDGSDDSDDDKFRPKGKNLKSKKSA
SKSSQYTIKVKR
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgcccccacaaactagaagaatggcgttcccgaaggtggtcattgagagagaaacggac
tctgagcaaagctcatccgaagaagacgaagcagacgtagaacaagaggaagaggaagtg
ttggagagcgaaaatgaaggaaaagtcgaacaggctctggatgaaaagaagaaagggaaa
gctcccattacgattagtctgaagaaagtttgcaaagtgtgcaaaaagcctggacatgaa
gctggtttcaaaggcgctacttacattgattgcccaatgaaaccttgctttctttgtaaa
atgcctggccacactacagtggcatgcccacaccgagtggctacagagtatggggtcgtc
ccagcaccccataaaagtacccggaacgcgttggagtatatgtttgaacgccagattaga
cctcgtgttcctccaatcaagccagcatttgtgatcccagatcaagtaagttgtgcagtt
atcagatatcacagtagacgggtaactagcttggagttccatccaacaaaaaataacatt
cttttatctggggataagaaaggacaacttggagtctgggattttgtcaaagtacacgaa
aagattgtttatggaaatgtacactcatgtatactcaacaacatgaagtttaaacctgca
agtgatgatacagtctatgctgcatcctcagatggaactattagttgcactgatttggag
actggaatttcagtatctctgatgaaccttaaccctgatggatggcaggggcaaaacagc
tggaggatgctttatggcatggatatcaatgcagaaaaaggtgctgtgcttgttgctgat
aacttcggttttctgtacttggttgatactcgctccaatgacccaactgggaagccaatt
ttgatccataagaaaggtagcaaagttgttggactccactgcaatcctgttcaaccagac
cttctcctgagttgcggaaatgatcactttgctcgaatatgggacattcgtcacatcgaa
gctggttcttccatttatgaccttgcgcacagccgtgttgttaactctgcatatttttct
ccagtgtctggcagcaaaattcttagcacttcacaggacaaccgtcttcgtatatgggac
tccatatttggcaatatggattcaccaagccgagagattgtacacagtcatgactttaat
cgccatctgactgctttcaaagctgaatgggatccaagggactcgtcggagtcccttgca
gttattggtcgttatataagtgagaactatgacggagctgccttgcatcccattgatttt
attgacgtcagcacaggacaactagttgctgaggtcatggatccaaacatcactacaatc
agtccagtgaacaagctacatccgcgtgatgatgttttggcatctggtagttcaaggtca
cttttcatttggaagccgaaggagaagtgcgagccggtggaacagaaggatgaagggaag
attgttatttgtgctggagctgagaagaagcggaaccggaagcttggggacggaagtgat
gattctgatgatgacaagttccgccccaagggcaagaatttaaagtccaaaaaatctgct
tcaaaatcaagtcaatatactattaaggttaaacgctga

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