Prunus persica (peach): 18774206
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Entry
18774206 CDS
T03092
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
pper
Prunus persica (peach)
Pathway
pper03420
Nucleotide excision repair
pper04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18774206
09124 Replication and repair
03420 Nucleotide excision repair
18774206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pper04121
]
18774206
03400 DNA repair and recombination proteins [BR:
pper03400
]
18774206
Ubiquitin system [BR:
pper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
18774206
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
18774206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
PQQ_3
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
18774206
NCBI-ProteinID:
XP_007208596
UniProt:
M5WSK6
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Position
G6:complement(4054626..4059565)
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AA seq
552 aa
AA seq
DB search
MPPQTRRMAFPKVVIERETDSEQSSSEEDEADVEQEEEEVLESENEGKVEQALDEKKKGK
APITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTVACPHRVATEYGVV
PAPHKSTRNALEYMFERQIRPRVPPIKPAFVIPDQVSCAVIRYHSRRVTSLEFHPTKNNI
LLSGDKKGQLGVWDFVKVHEKIVYGNVHSCILNNMKFKPASDDTVYAASSDGTISCTDLE
TGISVSLMNLNPDGWQGQNSWRMLYGMDINAEKGAVLVADNFGFLYLVDTRSNDPTGKPI
LIHKKGSKVVGLHCNPVQPDLLLSCGNDHFARIWDIRHIEAGSSIYDLAHSRVVNSAYFS
PVSGSKILSTSQDNRLRIWDSIFGNMDSPSREIVHSHDFNRHLTAFKAEWDPRDSSESLA
VIGRYISENYDGAALHPIDFIDVSTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRS
LFIWKPKEKCEPVEQKDEGKIVICAGAEKKRNRKLGDGSDDSDDDKFRPKGKNLKSKKSA
SKSSQYTIKVKR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcccccacaaactagaagaatggcgttcccgaaggtggtcattgagagagaaacggac
tctgagcaaagctcatccgaagaagacgaagcagacgtagaacaagaggaagaggaagtg
ttggagagcgaaaatgaaggaaaagtcgaacaggctctggatgaaaagaagaaagggaaa
gctcccattacgattagtctgaagaaagtttgcaaagtgtgcaaaaagcctggacatgaa
gctggtttcaaaggcgctacttacattgattgcccaatgaaaccttgctttctttgtaaa
atgcctggccacactacagtggcatgcccacaccgagtggctacagagtatggggtcgtc
ccagcaccccataaaagtacccggaacgcgttggagtatatgtttgaacgccagattaga
cctcgtgttcctccaatcaagccagcatttgtgatcccagatcaagtaagttgtgcagtt
atcagatatcacagtagacgggtaactagcttggagttccatccaacaaaaaataacatt
cttttatctggggataagaaaggacaacttggagtctgggattttgtcaaagtacacgaa
aagattgtttatggaaatgtacactcatgtatactcaacaacatgaagtttaaacctgca
agtgatgatacagtctatgctgcatcctcagatggaactattagttgcactgatttggag
actggaatttcagtatctctgatgaaccttaaccctgatggatggcaggggcaaaacagc
tggaggatgctttatggcatggatatcaatgcagaaaaaggtgctgtgcttgttgctgat
aacttcggttttctgtacttggttgatactcgctccaatgacccaactgggaagccaatt
ttgatccataagaaaggtagcaaagttgttggactccactgcaatcctgttcaaccagac
cttctcctgagttgcggaaatgatcactttgctcgaatatgggacattcgtcacatcgaa
gctggttcttccatttatgaccttgcgcacagccgtgttgttaactctgcatatttttct
ccagtgtctggcagcaaaattcttagcacttcacaggacaaccgtcttcgtatatgggac
tccatatttggcaatatggattcaccaagccgagagattgtacacagtcatgactttaat
cgccatctgactgctttcaaagctgaatgggatccaagggactcgtcggagtcccttgca
gttattggtcgttatataagtgagaactatgacggagctgccttgcatcccattgatttt
attgacgtcagcacaggacaactagttgctgaggtcatggatccaaacatcactacaatc
agtccagtgaacaagctacatccgcgtgatgatgttttggcatctggtagttcaaggtca
cttttcatttggaagccgaaggagaagtgcgagccggtggaacagaaggatgaagggaag
attgttatttgtgctggagctgagaagaagcggaaccggaagcttggggacggaagtgat
gattctgatgatgacaagttccgccccaagggcaagaatttaaagtccaaaaaatctgct
tcaaaatcaagtcaatatactattaaggttaaacgctga
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