Prunus persica (peach): 18774440
Help
Entry
18774440 CDS
T03092
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18774440
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pper00535
]
18774440
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
18774440
Meiosis-specific proteins
Cohesin complex and associated proteins
18774440
Proteoglycans [BR:
pper00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
18774440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Myosin_tail_1
Microp_apicomplexa_7
Cytochrom_C_2
Motif
Other DBs
NCBI-GeneID:
18774440
NCBI-ProteinID:
XP_007208731
LinkDB
All DBs
Position
G6:12884368..12901651
Genome browser
AA seq
1204 aa
AA seq
DB search
MYIKQVIIEGFKSYREQVATEAFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNADNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRRQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELQDARQKLA
EVEDARNKVSETSTKMYNSVLDAHEKSKDLDKIMKDLTKELQALSKEKEAIEKQRTEAIK
KHTELELDVKDLQEKISGNFGAKGDAVRQLQTLQKEIQDSMDELEKMNPLYEDQVMKEKE
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNLAQEQKLQDEI
KRLNTELSERDAYIESRRREIATIESLISQSHAGFNHHKSQRDKLQDERKSLWRKETELS
AEIEKLRTEVEKAEKSLDHATPGDVRRGLNSVRKICREYKIPGVFGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSLKGGRVTFIPLNRVKAPRVIYPQNSDVVPL
LKKLKFAPNYNPAFAQVFARTVVCRDLDVATKVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMCTIIQNTKSVNMKEEELEKIRFMLQEIDQKITDLVTEQQKIDAKRAHDKS
ELEQLKQDIANADKQKILISKALGNKEKSLADVRSQIDQLRASMAMKRAEMGTDLIDHLT
PVEKDLLSRLNPEIADLKEKLILCKTDRIETESRKAELETNLTTNLKRRKQELEAIISTM
ETDNLHGEAEIKSQELNDARLLVEDLTEQLRRVSESIDGQSKQLRRIKDEKTKLKNLEDN
YERTLQDEAKELEQLLSKRNMFLAKQEEYSKKIRELGPLSSDAFETYKRRSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIGELIQVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGHQGDDDQDEDGPREADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVSDKIYGVEHKNRVSRVNVVLKEDALDFIEHDQS
HNAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcaggttataattgaaggatttaagagctacagagaacaagttgctact
gaggccttcagcccaaaagttaattgtgttgttggtgccaatgggtcgggaaagacgaat
ttcttccatgcaattcggtttgtactaagtgaccttttccaaaaccttcggagcgaggat
aggcatgctctactccatgagggggcaggtcaccaagtattatctgcgtttgtggagatt
gtctttgataatgctgacaatcgaatcccggttgataaggaggaagtgcgtttgcgaaga
accattggtttgaagaaggatgagtatttcttggatggaaaacacatcacgaaaaccgag
gtcatgaatttgctggaaagtgctgggttctctcgctccaatccttattatgttgtgcag
caaggaaagatagcatcattgacactgatgaaagactctgaacggctggatttactgaag
gaaattggtggcactcgggtgtatgaggagagacgtcgagaaagtttgaaaattatgcag
gaaactggaaacaaaagaaggcagataattcaagttgttcagtacttggacgagagatta
aaggaattggatgaagagaaagaggaactgagaaagtatcagcaacttgacaagcagcga
aaatctttggaatacactatttatgacaaggaacttcaggatgctcgccaaaaactggca
gaggtagaagatgctcgaaacaaggtttctgaaacgtcaacgaagatgtataatagcgtg
ctggatgcccatgaaaagtccaaggacttggacaagattatgaaggatctgactaaagag
cttcaagctttatctaaagagaaagaagcaatagaaaaacaaagaacagaagcaataaag
aagcatacagagcttgagcttgatgtgaaagatttgcaggagaagatatctggaaacttt
ggagccaaaggagatgctgtgagacagttgcagactctgcagaaagaaattcaggattca
atggatgaacttgagaaaatgaatcctctgtatgaggatcaagtcatgaaggaaaaggag
atcacaaaaggaataatggaacgtgagaagcagcttagcatactttatcaaaaacaaggt
cgtgccacccagttttcaagtaaagccgctcgtgacaaatggctccaaaaggaaattgat
gatctcgagcgagttctttcttcaaatttggcacaggagcaaaaacttcaggatgaaatt
aaacggcttaatactgagttgagcgagcgggatgcctacattgagtctcgaagaagagag
attgctactattgaatctctcatctctcagtcacatgcagggttcaatcatcataagtca
cagagggacaagttgcaggatgagcgcaagtccctgtggaggaaggaaactgaactttct
gctgaaattgagaagctgagaacagaagttgagaaggctgaaaagagcctggatcatgcg
actcctggtgatgtcaggagagggctaaattctgttcgtaagatttgcagagagtataaa
attcctggggtatttggcccaattattgagttgcttgattgcgatgaaaagttttttact
gctgttgaagtaactgctgggaacagcttgtttcacgttgtggttgaaaatgatgaaata
tcaacacagataattaggcaccttaattcattgaagggtggacgagttacgtttatcccc
ttaaatagggtgaaggctccacgggtaatttatccacagaattcagatgtggttcctctg
ttaaagaagttaaagtttgctccaaactataacccagcatttgcccaggtatttgcaaga
acagttgtttgtcgagacctggatgtggctacaaaggttgctcgtactgatggtctagac
tgcattactttggaaggtgatcaggtcagcaagaagggtggtatgacaggagggttttat
gaccatagacgttcaaaattgaagtttatgtgtacaatcatacagaacacaaaatctgtc
aacatgaaggaagaagaactggagaaaattagatttatgcttcaagagatagaccagaaa
attacagatctcgtaactgaacagcagaaaattgatgctaagcgggcccacgacaaatca
gaactagaacagcttaagcaggacattgccaatgctgataagcagaaaattttgatttct
aaagctcttgggaataaggaaaaatcacttgctgatgtgcggagtcaaattgatcagctt
agagccagtatggccatgaagagggctgaaatgggcacagatctcattgatcatttaact
ccagtggagaaggatcttctctcaagattaaaccctgaaatagcagatcttaaagagaag
cttattttatgcaagacagatcgtattgagactgagtcaagaaaggcagagctcgagact
aatttaaccacaaaccttaagaggcgtaagcaagaactagaggccataatctctaccatg
gagactgacaatttgcatggtgaagctgaaattaagagtcaggaactgaatgatgctaga
ttgttggttgaagatttaacagagcagctcagaagagtttccgaaagcatagatggccag
tcaaagcaactcaggagaatcaaagatgaaaagactaagttaaagaatttggaagacaac
tatgagaggactcttcaggatgaagccaaagagctagagcaacttttgagtaaaagaaat
atgtttcttgctaaacaagaagaatactcgaagaaaatcagggaattgggcccattgtct
tcagatgcttttgaaacgtataagcgaaggagtatcaaagaattgcataaaatgctgcac
agatgcaatgagcagctgcaacaatttagtcatgtcaacaagaaagcacttgatcaatat
gtaaattttacagaacaacgagaagaactccagaaaaggcaagccgagctggatgcaggt
gatgagaaaattggagaacttatacaggttttggatcaaaggaaggatgaatcaatagaa
cgtacttttaaaggtgttgctaggcactttcgagaagttttctcagaacttgtgcaaggt
ggccatggttaccttgttatgatgaagaaaaaggatggtcaccaaggtgatgatgatcag
gatgaggatggaccacgtgaagcggatttagagggaagagtcgagaaatatattggtgta
aaagtgaaggtttcttttaccggacaaggggaaactcagtcgatgaagcagttgtccggg
ggtcagaaaactgttgttgcgctaacgcttatctttgccatccagcgatgtgatcctgct
cccttttatcttttcgatgaaatagatgcagcactggatcctcaataccgaacagctgtt
ggaaatatgatccggcgcctggcagacatggcaaatactcaatttataaccacaacattc
cggccagagcttgtgaaagtttctgacaaaatatatggtgttgaacataaaaacagggtg
agccgtgtcaacgttgtcttgaaggaagatgcattggacttcatcgagcatgaccagtct
cacaatgcagagtaa
DBGET
integrated database retrieval system
