Prunus persica (peach): 18775742
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Entry
18775742 CDS
T03092
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18775742
09123 Folding, sorting and degradation
03018 RNA degradation
18775742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18775742
03041 Spliceosome [BR:
pper03041
]
18775742
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18775742
mRNA degradation factors
5'-3' decay
Lsm complex
18775742
Spliceosome [BR:
pper03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
18775742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
18775742
NCBI-ProteinID:
XP_020420014
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Position
G5:complement(18389169..18393232)
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AA seq
98 aa
AA seq
DB search
MSSGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISIVGELDADLDSTVDWSNMKAYPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtggccctggtcttgagtcacttgttgatcaaacaatttcagttatcacaaat
gatggacggaatattgtgggagtcttgaaaggctttgaccaagctacgaatatcattctc
gatgaatctcatgaacgtgttttctctacaaaggagggtgttcagcaactcgtgttggga
ttgtatataatcagaggtgacaacataagcattgttggggaactagatgcagatcttgat
tctactgttgactggtcgaatatgaaagcctatcccctcaagcctgtcatccactga
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