KEGG   Prunus persica (peach): 18776290
Entry
18776290          CDS       T03092                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pper  Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:pper00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pper03009]
    18776290
Ribosome biogenesis [BR:pper03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    18776290
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_HPS5 NBCH_WD40 WD_LRWD1 Beta-prop_SCAP ANAPC4_WD40 VPS8_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR75_2nd Beta-prop_VPS8 PEP5_VPS11_N Beta-prop_SPT8 PROPPIN WDR54 Ge1_WD40 CNH
Other DBs
NCBI-GeneID: 18776290
NCBI-ProteinID: XP_020419681
LinkDB
Position
G5:13786572..13790061
AA seq 467 aa
MAKNGSEAVVVCSDKSMGIGITIWGIDTGDRLLHIPTCASAPHGLVCLRNQFLVASQIHK
HGSVGGGAISMWPLNKPQQPIRSYPLEAIGPLSCTKDGVYLAGGALSGNVYLWEVANGKL
LKTWRGHHRSLNCMLFSDDGSLLVSASDDGMICVWSMVGLLDMEDSQSFPSLLHYSMEHK
SSITGLLTTSGSSNVVLISSSLDGSCKVWDLVLGKLMQTQVYLLAITAVVLHPTEQLFFS
GSIDGRIFVNKLEIGLVENSLAAAEDQKSVIKGHKGAVTALTFSQAGLVSASEDCTICIW
DITNWAIIRRFDHKKGAVTNLAVIPRSSLLSVSNHRRVSNAFGVSSLDKYPQPPNSSKEK
MPLLSSCHFLKGNQTTHSEQQICDTEEEFSPAAMQMKLETSLEHRMWATRMAKHVMEMNT
HLQTRLLDLMQSGLLRSTSTEMDSPPTKKRETRMFDESPPFQGEEQP
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggctaaaaatggtagcgaggcagtggttgtgtgcagcgacaagagcatgggaataggg
ataactatatggggcatagacacgggggatcgtcttcttcacataccaacctgtgcttct
gctcctcatggtcttgtgtgcctgagaaaccagttccttgtagcttctcagattcacaaa
catggctctgttggaggaggggccatttctatgtggcccttgaacaagcctcagcagcct
attcggagctacccactagaggccattgggccactttcttgcacaaaggatggtgtatat
cttgcaggtggtgccctatctggaaacgtttacctttgggaggttgccaatggaaaattg
ctcaaaacttggcgtggacatcatagatctttgaactgtatgctgttttctgatgacggc
tctcttctcgtttctgcttcagatgatgggatgatatgtgtgtggtctatggtcggtttg
ctggacatggaagattctcaaagctttccctcgttattacattattcaatggagcataaa
tcctctataactggcctgttaactacatcaggcagctcaaatgtagtcttaatatcaagc
tcacttgatggctcatgcaaggtatgggatttagtcttgggaaagcttatgcaaactcaa
gtttatctgctagcaataactgcagttgttcttcacccaacagagcagctctttttttct
ggaagtatagatggaagaatttttgtgaacaaacttgaaatcggactggtcgaaaattct
ttggctgctgctgaagatcaaaaatctgtgataaaaggacacaagggagctgtcactgca
ttaaccttcagtcaagcaggtctggtatctgcatctgaggactgcaccatctgcatctgg
gatatcaccaattgggcaatcatccgaagattcgaccataaaaaaggggctgtaactaat
ctggcagtgattccacggtcctcattgctttctgtgtcaaaccatcggagagtttccaat
gcatttggtgtttcttcgctcgacaagtatccacagcctcccaactcatccaaggagaaa
atgcctcttctttcatcatgccacttcctcaaaggaaaccaaaccactcattctgaacaa
caaatatgtgacacagaggaagaattcagtcctgcagcaatgcaaatgaagttggaaacc
agcctagagcaccggatgtgggcaacaagaatggcaaaacatgtgatggagatgaacacg
catttgcagacacgtttgttagacttgatgcagagcggattgttgcggtccacgtctact
gaaatggattcacctccaacaaaaaagagagagactcgcatgtttgatgagagtccccca
tttcagggagaggagcaaccataa

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