Prunus persica (peach): 18776629
Help
Entry
18776629 CDS
T03092
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X2
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18776629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18776629
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18776629
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
18776629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
LCE6A
Motif
Other DBs
NCBI-GeneID:
18776629
NCBI-ProteinID:
XP_007210379
UniProt:
M5WQI7
LinkDB
All DBs
Position
G5:18213253..18221838
Genome browser
AA seq
896 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWINNVVGELESQIDSFEAEIEGLSFRKGKGRPPRLTHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSEVDELYNTLPLDKVES
LEDLVTIVPPGLVKGAPVLGLKTSLAVSASPMPAAATSTTQQSTSVQEPVEDTVSQDSNV
DNIPRTPPPKSSALASSPASTPVGGLASPLSVSVSSHNLPGPPSVSAVPGSIAVRGVTEN
AGASNSSSPVSLSASVKEEELASFPGRRPSPSLSDGGLVRGVGRGGLSAQSPSSIPLSSS
NVAPSNSTLSAAPSVSDVTKRNILGADERIGSSSVVQPLVSPISNRLILPQAAKASDGSI
PVDSGNAGEAAAIPGRAFSPSMVSSMQWRPGSSFQNQNEAGLFRGRTEIAPDQREKFLQR
LQQVQQGHSTILGMPPLAGGNHKQFSGQQQNPLLQQNSSVSSQAGLGVGVQAPGLGTVAP
TTLQQQLNSIHQQSNQQALMSSGPKEADVGHPKVEDQQQQQSTPDDSTADSTPVSGLVKN
LINEDDLKASYAIDSLAGVSGSSTEPAQVPRDIDLSPGQPLQPNQPSGSLGVIGRRSVSD
LGAIGDNLSGSTPNSGGTHDQLYNLQMLEAAYYKLPQPKDSERARSYTPRHPAITPPSYP
QAQAPIVNNPAFWERLGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTW
FQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagtcggaaacttcagggcgagatcgaccgcgttctcaagaaggtccaagaa
ggcgtggatgtcttcgatagcatatggaacaaggtttatgatacggacaatgcgaaccag
aaggaaaagtttgaggcggacctaaagaaggagattaagaagctccagaggtacagggac
caaatcaagacttggattcaatccagtgaaatcaaggataagaaggtcagtgcctcttat
gagcaggctctggtggatgctcgcaagcttatcgagcgtgaaatggaaaggtttaagatt
tgtgaaaaggagaccaaaacaaaagcattttctaaagaaggcttgggccaacaacctaaa
accgatccgagggagaaggccaagtctgagacaagggattggataaacaatgtggttggg
gagttggaatctcagattgacagctttgaagctgagattgaaggcctatctttcaggaaa
gggaagggcagaccacccagactgacccatctagagacatctattactcggcataaggct
cacataatgaagttagaactgatcctgaggctattggataatgatgaactgagtcctgag
caggtcaatgatgtcaaagacttcttggaagactatgttgaacgcaatcaggaggatttt
gatgaatttagtgaagttgatgagctttacaacaccttaccattggacaaagtggagtcc
cttgaagatctggttactattgtccctcctggtcttgtcaagggtgcaccggtgcttggc
ttgaagacttctttggcagtatccgcatctccaatgcctgccgcagctacttccactact
cagcagagtacttctgtacaagagccagttgaagatacagtttcccaggacagtaatgtt
gataatattcctaggactccacctcctaaaagtagtgcacttgcttcttctcctgcatca
acaccagttgggggtcttgcaagtcctctctctgtgagtgtttcatctcacaatttgcct
ggtccgccaagtgtttcagccgttccaggttcaattgctgttcgtggtgtcacagagaat
gcaggagcttctaattcttcatctcctgtaagtctgtccgcttctgtgaaggaagaagaa
ttagcaagcttcccgggccgtagaccatcgccatctctttctgatggtgggcttgtgagg
ggcgttggtagaggtggcctctctgcacagagtccatctagtatccctcttagttctagc
aatgtagctcctagtaatagtacccttagtgcagctccttcggtttctgatgtgacaaag
agaaatatattgggagctgatgagagaattgggagtagtagcgtagtgcagcctcttgtt
tcccctataagtaacagattgatcttgcctcaagctgccaaggctagtgatggaagtatt
ccagttgattctggtaatgctggtgaggctgctgctattcctggcagagcattttctcct
tctatggtctccagcatgcaatggaggcctggaagttccttccaaaaccagaacgaagcg
gggttgtttcgtggaagaactgaaatagcacctgatcagagggagaaatttttgcagcgg
ctccaacaagtgcagcaaggtcacagtaccattctcggcatgcctcctcttgctggtgga
aatcataagcaattttctggacagcagcaaaatccactcttacaacagaactcatctgta
tcttctcaagctggcctcggagtaggggtacaagccccaggtcttggtactgttgcacct
accaccttacagcagcagctaaattctatccatcaacagtctaaccaacaggcattgatg
tcgagtggaccaaaagaagctgatgttggtcatccaaaagttgaggaccagcagcaacaa
caaagtacacctgatgattcaactgcggactctactccggtttctgggcttgtaaagaat
ctaattaatgaggatgatttgaaagcctcatatgcaattgattctctggctggagtttct
ggctcttcgacagagcctgctcaagtaccacgagatatcgatctctctcctgggcaacct
ttacagcccaatcaaccttctggtagtcttggtgttattggccgaagaagtgtttctgac
cttggtgcaattggtgataacctttctggatcaactcctaattctgggggaacgcacgat
cagttgtataatttgcagatgcttgaggctgcttattacaaacttccacaacccaaagac
tcggaacgtgcaaggagctacactccaaggcaccctgcaataactcctcctagctacccc
caagcacaagcgcctattgttaacaatcctgccttctgggaacgtttgggtcttgaaccg
tacggcactgataccctgttctttgcattttactatcagcagaacacttatcagcaatat
ttggcagccaaagagttgaagaagcaatcttggagataccacaggaaatataacacttgg
tttcaacgacacgaggagccaaaagttgccactgatgaatatgaacaggggacatatgtg
tactttgacttccatatcgcaaatgatgatctacaacatggatggtgtcaaaggatcaaa
accgagtttacttttgaatataactatcttgaagatgaacttatcgtttag
DBGET
integrated database retrieval system
